Gene: Carub.0003s2729
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s2729
- Transcript Identifier Carub.0003s2729.1
- Gene Type Coding gene
- Location scaffold_3 : 10431038-10433209 : negative
Gene Family Information
- ID HOM05D003526
- #Genes/#Species 193/99
- Phylogenetic origin
- ID ORTHO05D004123
- #Genes/#Species 190/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0003s2729.v1.1
- pacid 39242416
- synonym Carubv10014566m.g
Descriptions
- Description PTHR10476//PTHR10476:SF12 - CHARGED MULTIVESICULAR BODY PROTEIN // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007034 | IEA | InterPro | vacuolar transport | |
| GO:0015031 | ISO | PLAZA Integrative Orthology | protein transport | AT2G06530 |
| GO:0070676 | ISO | PLAZA Integrative Orthology | intralumenal vesicle formation | AT2G06530 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G06530 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005770 | ISO | PLAZA Integrative Orthology | late endosome | AT2G06530 |
| GO:0010008 | ISO | PLAZA Integrative Orthology | endosome membrane | AT2G06530 |
| GO:0005771 | ISO | PLAZA Integrative Orthology | multivesicular body | AT2G06530 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005024 | Snf7 family |
| Mapman id | Description |
|---|---|
| 22.4.1.3.3 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.component VPS2/CHMP2 |