Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p25980 Brassica napus
Aa31LG9G9570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3890 Anthoceros agrestis
Actinidia01893 Actinidia chinensis
Actinidia05616 Actinidia chinensis
Ah.14g089320 Amaranthus hybridus
AL6G48430 Arabidopsis lyrata
Aqoxy1G02553 Aquilegia oxysepala
Aqoxy4G01061 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FP1IKL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H4J46B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HK023S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PB6F44 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WE2A0Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XFU5ID Arachis hypogaea
AT4G04920 Arabidopsis thaliana
ATR0680G247 Amborella trichopoda
Atru.chr10.1936 Acer truncatum
AUR62014791 Chenopodium quinoa
AUR62016978 Chenopodium quinoa
BcaB01g01847 Brassica carinata
BcaB05g23702 Brassica carinata
BcaC04g21345 Brassica carinata
BolC9t56130H Brassica oleracea
BraA09t38165Z Brassica rapa
C09p32950 Brassica napus
CAN.G1164.6 Capsicum annuum
CAN.G1164.7 Capsicum annuum
CANSAT35G0505 Cannabis sativa
CARHR252610 Cardamine hirsuta
Carub.0006s3284 Capsella rubella
Ca_00312_v3 Cicer arietinum L.
Ca_18531_v3 Cicer arietinum L.
CBR_g31987 Chara braunii
Cc02_g13070 Coffea canephora
CDE08G1359 Ceratophyllum demersum
Cfa000415 Carpinus fangiana
Ciclev10014062m.g Citrus clementina
CiPaw.09G057400 Carya illinoinensis
ClCG03G005910 Citrullus lanatus
COL.COLO4_06328 Corchorus olitorius
COL.COLO4_06329 Corchorus olitorius
COL.COLO4_31495 Corchorus olitorius
COL.COLO4_31502 Corchorus olitorius
Cpa.g.sc1016.1 Carica papaya
Cpa.g.sc27.67 Carica papaya
Cpa.g.sc3186.1 Carica papaya
Cre04.g220600 Chlamydomonas reinhardtii
CsaV3_1G012140 Cucumis sativus L.
CSS0028341 Camellia sinensis var. sinensis
CSS0036865 Camellia sinensis var. sinensis
DCAR_028097 Daucus carota
Dinv07537 Davidia involucrata
Dinv40537 Davidia involucrata
Dinv40538 Davidia involucrata
Duzib192G0623 Durio zibethinus
ECA234G2309 Erigeron canadensis
EL10Ac5g12135 Beta vulgaris
EL10Ac8g20345 Beta vulgaris
Eucgr.A00068 Eucalyptus grandis
Eucgr.D00642 Eucalyptus grandis
FAN11G2101 Fragaria x ananassa
FAN21G2488 Fragaria x ananassa
FAN25G2846 Fragaria x ananassa
FvH4_3g04860 Fragaria vesca
Glyma.13G181200 Glycine max
Glyma.13G241100 Glycine max
Glyma.15G072266 Glycine max
Glyma.15G072332 Glycine max
Gohir.A10G024100 Gossypium hirsutum
Gohir.D10G024800 Gossypium hirsutum
Gorai.011G026100 Gossypium raimondii
GSVIVG01002029001 Vitis vinifera
GSVIVG01002224001 Vitis vinifera
GSVIVG01004519001 Vitis vinifera
GSVIVG01004520001 Vitis vinifera
HanXRQChr16g0511231 Helianthus annuus
HanXRQChr16g0518201 Helianthus annuus
Haze_06501 Corylus avellana
Hma1.2p1_0126F.1_g059210 Hydrangea macrophylla
HPP92_028517 Vanilla planifolia
HPP92_028530 Vanilla planifolia
Lalb_Chr05g0218401 Lupinus albus
Lalb_Chr09g0327601 Lupinus albus
Lalb_Chr20g0121981 Lupinus albus
Lj1A1207T84 Lonicera japonica
Lj2A286G46 Lonicera japonica
Lj4g0014475 Lotus japonicus
Lj6g0009911 Lotus japonicus
Lsat_1_v5_gn_1_36880 Lactuca sativa
Lsat_1_v5_gn_1_5521 Lactuca sativa
Lsat_1_v5_gn_2_57220 Lactuca sativa
Lsat_1_v5_gn_3_132221 Lactuca sativa
Lsat_1_v5_gn_4_122420 Lactuca sativa
Lsat_1_v5_gn_4_52460 Lactuca sativa
Lsat_1_v5_gn_4_97940 Lactuca sativa
Lsat_1_v5_gn_5_151900 Lactuca sativa
Lsat_1_v5_gn_7_19581 Lactuca sativa
Lsat_1_v5_gn_7_19601 Lactuca sativa
Lsat_1_v5_gn_8_106681 Lactuca sativa
Lsat_1_v5_gn_8_41901 Lactuca sativa
Lsat_1_v5_gn_8_47460 Lactuca sativa
Lsat_1_v5_gn_9_106101 Lactuca sativa
Lsat_1_v5_gn_9_124840 Lactuca sativa
Lsat_1_v5_gn_9_84841 Lactuca sativa
Manes.17G043400 Manihot esculenta
Mapoly0120s0029 Marchantia polymorpha
Mapoly0126s0036 Marchantia polymorpha
MBI17_g03749_MAGBIO Magnolia biondii
MD01G1005800 Malus domestica
MD05G1315300 Malus domestica
MD05G1315900 Malus domestica
MD05G1316200 Malus domestica
MD10G1296700 Malus domestica
Medtr1g072060 Medicago truncatula
Medtr1g072070 Medicago truncatula
Medtr2g013150 Medicago truncatula
Medtr2g013160 Medicago truncatula
Medtr2g013180 Medicago truncatula
Medtr2g013190 Medicago truncatula
Medtr3g057920 Medicago truncatula
Medtr3g057930 Medicago truncatula
Medtr4g010370 Medicago truncatula
Medtr4g088965 Medicago truncatula
Medtr5g040120 Medicago truncatula
Medtr7g039500 Medicago truncatula
Medtr8g066490 Medicago truncatula
MELO3C002588.2 Cucumis melo
Migut.M01189 Erythranthe guttata
MSTRG.7305 Avicennia marina
Nitab4.5_0005271g0020 Nicotiana tabacum
Nitab4.5_0006478g0020 Nicotiana tabacum
Nn1g04016 Nelumbo nucifera
Oeu038218.1 Olea europaea
Oeu047005.1 Olea europaea
Os10g0498700 Oryza sativa ssp. japonica
Peaxi162Scf00379g00211 Petunia axillaris
PGR004G0168 Punica granatum
PGSC0003DMG400022382 Solanum tuberosum
Phvul.002G227600 Phaseolus vulgaris
Phvul.006G187600 Phaseolus vulgaris
Potri.004G040300 Populus trichocarpa
Potri.004G040400 Populus trichocarpa
Potri.011G049700 Populus trichocarpa
Pp3c9_3120 Physcomitrium patens
Prupe.4G043900 Prunus persica
Psat0s3229g0080 Pisum sativum
Psat0s4489g0120 Pisum sativum
Psat1g020360 Pisum sativum
Psat1g103240 Pisum sativum
Psat1g103400 Pisum sativum
Psat1g206120 Pisum sativum
Psat4g211760 Pisum sativum
Psat5g090280 Pisum sativum
Psat6g243040 Pisum sativum
Psat7g112840 Pisum sativum
PSO541G1427 Papaver somniferum
PSO675G2502 Papaver somniferum
QL05p039585 Quercus lobata
RcHm_v2.0_Chr5g0008021 Rosa chinensis
RhsimUnG0044700 Rhododendron simsii
Sabra04G0024900 Salix brachista
Sabra11G0034200 Salix brachista
SalBow8G0447 Salvia bowleyana
Sc05g0007810 Simmondsia chinensis
Sed0007449 Sechium edule
SEGI_00038 Sequoiadendron giganteum
SEGI_03870 Sequoiadendron giganteum
SEGI_16931 Sequoiadendron giganteum
SEGI_30667 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03976 Striga asiatica
SHI01791 Sapria himalayana
SHI01792 Sapria himalayana
SHI01796 Sapria himalayana
Solyc02g078520.4 Solanum lycopersicum
Sopen02g023370 Solanum pennellii
Sp6g04040 Schrenkiella parvula
SpUn0051_0020 Schrenkiella parvula
TAR627G0569 Trochodendron aralioides
TAR629G1272 Trochodendron aralioides
THA.LOC104806291 Tarenaya hassleriana
THA.LOC104812899 Tarenaya hassleriana
Thecc.06G190800 Theobroma cacao
Thhalv10028367m.g Eutrema salsugineum
TPR.G12094 Trifolium pratense
TPR.G12099 Trifolium pratense
TPR.G15630 Trifolium pratense
TPR.G36850 Trifolium pratense
TWI38G0549 Tripterygium wilfordii
TWI63G0185 Tripterygium wilfordii
unitig_748.g8004 Utricularia gibba
VMungo0251G3152 Vigna mungo
VMungo0540G1836 Vigna mungo
Zm00001eb044560 Zea mays

User provided reference genes

Program Settings