Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p23300 Brassica napus
Aa31LG6G15410 Aethionema arabicum
Aa31LG6G15420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2362 Anthoceros agrestis
Actinidia06565 Actinidia chinensis
Actinidia25645 Actinidia chinensis
Actinidia25646 Actinidia chinensis
Actinidia36591 Actinidia chinensis
Ah.02g124690 Amaranthus hybridus
Ah.03g141700 Amaranthus hybridus
AL7G12080 Arabidopsis lyrata
Aqoxy1G03668 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.41RR18 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7DX4IN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DC8DPX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E07S37 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LC8K5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R7GNZQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5WRJR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X4FXIQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9QREV Arachis hypogaea
AT4G39850 Arabidopsis thaliana
ATR0763G048 Amborella trichopoda
Atru.chr4.74 Acer truncatum
AUR62024498 Chenopodium quinoa
AUR62026083 Chenopodium quinoa
BcaNung02306 Brassica carinata
BcaNung03401 Brassica carinata
BolC3t20096H Brassica oleracea
BolC3t20097H Brassica oleracea
BolC7t46697H Brassica oleracea
BraA08t34285Z Brassica rapa
C03p78380 Brassica napus
C07p62850 Brassica napus
CAN.G441.2 Capsicum annuum
CANSAT54G2466 Cannabis sativa
CARHR246850 Cardamine hirsuta
Carub.0007s0178 Capsella rubella
Ca_16534_v3 Cicer arietinum L.
CBR_g326 Chara braunii
Cc07_g15310 Coffea canephora
CDE02G0851 Ceratophyllum demersum
CDE04G0016 Ceratophyllum demersum
Cfa002672 Carpinus fangiana
Cfa023170 Carpinus fangiana
Cfa025414 Carpinus fangiana
Ciclev10024720m.g Citrus clementina
CiPaw.03G141400 Carya illinoinensis
CiPaw.04G098900 Carya illinoinensis
ClCG10G008740 Citrullus lanatus
ClCG10G008750 Citrullus lanatus
COL.COLO4_09956 Corchorus olitorius
COL.COLO4_12402 Corchorus olitorius
COL.COLO4_31263 Corchorus olitorius
Cpa.g.c44160 Carica papaya
Cpa.g.sc213.16 Carica papaya
Cpa.g.sc230.3 Carica papaya
Cre15.g637761 Chlamydomonas reinhardtii
CsaV3_4G008940 Cucumis sativus L.
CSS0014940 Camellia sinensis var. sinensis
CSS0024265 Camellia sinensis var. sinensis
CSS0040169 Camellia sinensis var. sinensis
DCAR_003505 Daucus carota
Dinv16288 Davidia involucrata
Dinv21913 Davidia involucrata
Duzib147G0762 Durio zibethinus
Duzib264G1109 Durio zibethinus
ECA233G0491 Erigeron canadensis
ECA233G1869 Erigeron canadensis
ECA233G2957 Erigeron canadensis
ECA233G3468 Erigeron canadensis
EL10As8g23855 Beta vulgaris
Eucgr.H04794 Eucalyptus grandis
FAN19G1703 Fragaria x ananassa
FAN23G1356 Fragaria x ananassa
FAN28G0272 Fragaria x ananassa
FvH4_1g25840 Fragaria vesca
Glyma.05G178900 Glycine max
Glyma.08G136400 Glycine max
Glyma.11G239800 Glycine max
Glyma.18G017600 Glycine max
Gohir.A02G143400 Gossypium hirsutum
Gohir.A05G321213 Gossypium hirsutum
Gohir.A11G201000 Gossypium hirsutum
Gohir.A12G087500 Gossypium hirsutum
Gohir.D03G037100 Gossypium hirsutum
Gohir.D11G222000 Gossypium hirsutum
Gohir.D12G085800 Gossypium hirsutum
Gorai.003G038900 Gossypium raimondii
Gorai.007G239200 Gossypium raimondii
Gorai.008G096100 Gossypium raimondii
HanXRQChr03g0087081 Helianthus annuus
Haze_24942 Corylus avellana
Haze_26893 Corylus avellana
Hma1.2p1_0308F.1_g120170 Hydrangea macrophylla
Hma1.2p1_0308F.1_g120180 Hydrangea macrophylla
HPP92_016104 Vanilla planifolia
HPP92_016105 Vanilla planifolia
Hund19140 Selenicereus undatus
Lalb_Chr08g0231091 Lupinus albus
Lalb_Chr08g0231101 Lupinus albus
Lalb_Chr08g0231111 Lupinus albus
Lalb_Chr11g0075361 Lupinus albus
Lalb_Chr23g0277341 Lupinus albus
Lj4A888G17 Lonicera japonica
Lj6g0023245 Lotus japonicus
Lsat_1_v5_gn_3_100060 Lactuca sativa
Lsat_1_v5_gn_3_19400 Lactuca sativa
Lsat_1_v5_gn_3_4241 Lactuca sativa
Lsat_1_v5_gn_3_99921 Lactuca sativa
Lsat_1_v5_gn_4_101520 Lactuca sativa
Lsat_1_v5_gn_5_23900 Lactuca sativa
Lsat_1_v5_gn_7_10461 Lactuca sativa
Lsat_1_v5_gn_8_1020 Lactuca sativa
Manes.01G024001 Manihot esculenta
Manes.06G027900 Manihot esculenta
Manes.10G053150 Manihot esculenta
Manes.11G075250 Manihot esculenta
Manes.12G135600 Manihot esculenta
Manes.15G181801 Manihot esculenta
Mapoly0144s0028 Marchantia polymorpha
MCO02G235 Micromonas commoda
MCO02G363 Micromonas commoda
MD02G1255200 Malus domestica
MD07G1066800 Malus domestica
Medtr3g087350 Medicago truncatula
MELO3C018990.2 Cucumis melo
Migut.H01170 Erythranthe guttata
Migut.L00116 Erythranthe guttata
MSTRG.3782 Avicennia marina
Nitab4.5_0000104g0130 Nicotiana tabacum
Nitab4.5_0006517g0010 Nicotiana tabacum
Nn4g24881 Nelumbo nucifera
Nn4g24883 Nelumbo nucifera
Oeu002402.1 Olea europaea
Os01g0966100 Oryza sativa ssp. japonica
Os05g0107600 Oryza sativa ssp. japonica
Peaxi162Scf00212g01215 Petunia axillaris
PGR102G2959 Punica granatum
Phvul.001G251800 Phaseolus vulgaris
Phvul.002G255500 Phaseolus vulgaris
Potri.005G076200 Populus trichocarpa
Potri.007G092200 Populus trichocarpa
Pp3c14_6330 Physcomitrium patens
Pp3c16_16480 Physcomitrium patens
Pp3c17_11810 Physcomitrium patens
Pp3c27_1790 Physcomitrium patens
PRCOL_00001295 Prasinoderma coloniale
PRCOL_00002824 Prasinoderma coloniale
PRCOL_00003760 Prasinoderma coloniale
Prupe.2G084100 Prunus persica
Psat0s626g0040 Pisum sativum
Psat0s626g0080 Pisum sativum
Psat2g087320 Pisum sativum
Psat2g087480 Pisum sativum
Psat5g089680 Pisum sativum
PSO017G5498 Papaver somniferum
PSO170G3704 Papaver somniferum
QL06p049655 Quercus lobata
RcHm_v2.0_Chr3g0484971 Rosa chinensis
Rhsim10G0162600 Rhododendron simsii
Sabra05G0062800 Salix brachista
Sabra07G0075800 Salix brachista
SalBow5G0975 Salvia bowleyana
SalBow5G3202 Salvia bowleyana
Sc13g0001620 Simmondsia chinensis
Sed0020843 Sechium edule
SEGI_14643 Sequoiadendron giganteum
SEGI_16561 Sequoiadendron giganteum
SEGI_27089 Sequoiadendron giganteum
SEGI_33235 Sequoiadendron giganteum
SEGI_33364 Sequoiadendron giganteum
SGA_v2.0_scaffold47G17784 Striga asiatica
SMO118G0391 Selaginella moellendorffii
SMO351G0412 Selaginella moellendorffii
Solyc04g055120.3 Solanum lycopersicum
Solyc10g150127.1 Solanum lycopersicum
Sopen04g024980 Solanum pennellii
Sp7g36040 Schrenkiella parvula
TAR628G0828 Trochodendron aralioides
THA.LOC104807697 Tarenaya hassleriana
Thecc.01G102500 Theobroma cacao
Thhalv10011916m.g Eutrema salsugineum
Thhalv10024225m.g Eutrema salsugineum
Thhalv10028355m.g Eutrema salsugineum
TPR.G17853 Trifolium pratense
TWI74G1477 Tripterygium wilfordii
unitig_899.g15007 Utricularia gibba
vmacro12953 Vaccinium macrocarpon
VMungo0251G2994 Vigna mungo
VMungo1383G3521 Vigna mungo
Zm00001eb140100 Zea mays
Zm00001eb301970 Zea mays
Zm00001eb356090 Zea mays

User provided reference genes

Program Settings