Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11430 Brassica napus
A03p51930 Brassica napus
Aa31LG6G2100 Aethionema arabicum
Aa31sc55G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2303 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4333 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3142 Anthoceros agrestis
Actinidia02453 Actinidia chinensis
Actinidia29308 Actinidia chinensis
Actinidia29309 Actinidia chinensis
Actinidia29310 Actinidia chinensis
Actinidia33646 Actinidia chinensis
Ah.13g071230 Amaranthus hybridus
AL7G34630 Arabidopsis lyrata
Aqoxy3G00998 Aquilegia oxysepala
Aqoxy7G02779 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0SF8RD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.16LSI5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.40643C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A6QARX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D6X22R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DYC2U6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R9RUHP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SFPI36 Arachis hypogaea
AT4G19490 Arabidopsis thaliana
ATR1132G011 Amborella trichopoda
ATR1132G122 Amborella trichopoda
Atru.chr8.321 Acer truncatum
AUR62005919 Chenopodium quinoa
AUR62028144 Chenopodium quinoa
BcaC09g51402 Brassica carinata
BcaNung01774 Brassica carinata
BcaNung02560 Brassica carinata
BcaNung07226 Brassica carinata
BcaNung07304 Brassica carinata
BolC1t01321H Brassica oleracea
BolC7t45545H Brassica oleracea
BraA01t01089Z Brassica rapa
BraA03t14280Z Brassica rapa
C01p13480 Brassica napus
C07p50430 Brassica napus
CAN.G306.7 Capsicum annuum
CAN.G954.8 Capsicum annuum
CARHR226290 Cardamine hirsuta
Carub.0007s2172 Capsella rubella
Ca_02512_v3 Cicer arietinum L.
CBR_g45268 Chara braunii
CBR_g56099 Chara braunii
CBR_g66144 Chara braunii
Cc09_g07300 Coffea canephora
CDE02G2268 Ceratophyllum demersum
CDE09G0686 Ceratophyllum demersum
Cfa000748 Carpinus fangiana
Cfa023843 Carpinus fangiana
Ciclev10014122m.g Citrus clementina
CiPaw.09G149800 Carya illinoinensis
ClCG01G025690 Citrullus lanatus
COL.COLO4_26841 Corchorus olitorius
Cpa.g.sc192.16 Carica papaya
Cre02.g087551 Chlamydomonas reinhardtii
CsaV3_6G052920 Cucumis sativus L.
CSS0014471 Camellia sinensis var. sinensis
CSS0015411 Camellia sinensis var. sinensis
CSS0035493 Camellia sinensis var. sinensis
CSS0036853 Camellia sinensis var. sinensis
CSS0048234 Camellia sinensis var. sinensis
DCAR_001341 Daucus carota
DCAR_004311 Daucus carota
Dinv03119 Davidia involucrata
Duzib160G0577 Durio zibethinus
Duzib235G1444 Durio zibethinus
ECA236G0663 Erigeron canadensis
EL10Ac3g05104 Beta vulgaris
Eucgr.K01948 Eucalyptus grandis
FAN02G3168 Fragaria x ananassa
FAN05G1738 Fragaria x ananassa
FAN09G1882 Fragaria x ananassa
FAN10G3643 Fragaria x ananassa
FAN11G1212 Fragaria x ananassa
FAN14G4292 Fragaria x ananassa
FAN18G3112 Fragaria x ananassa
FAN27G0233 Fragaria x ananassa
FvH4_4g15181 Fragaria vesca
FvH4_4g15480 Fragaria vesca
FvH4_5g17630 Fragaria vesca
FvH4_6g01010 Fragaria vesca
Glyma.09G083800 Glycine max
Glyma.15G192300 Glycine max
Gohir.A10G004400 Gossypium hirsutum
Gohir.D10G004400 Gossypium hirsutum
Gorai.011G004800 Gossypium raimondii
GSVIVG01037972001 Vitis vinifera
HanXRQChr04g0119881 Helianthus annuus
HanXRQChr06g0183401 Helianthus annuus
HanXRQChr17g0556701 Helianthus annuus
Haze_05980 Corylus avellana
Haze_05982 Corylus avellana
Haze_05983 Corylus avellana
Hma1.2p1_0410F.1_g147020 Hydrangea macrophylla
HPP92_026238 Vanilla planifolia
Hund09767 Selenicereus undatus
Lalb_Chr08g0233181 Lupinus albus
Lj1A1155G48 Lonicera japonica
Lj1A1155T51 Lonicera japonica
Lj6g0004300 Lotus japonicus
Lsat_1_v5_gn_0_25080 Lactuca sativa
Lsat_1_v5_gn_2_79640 Lactuca sativa
Lsat_1_v5_gn_7_35621 Lactuca sativa
Lsat_1_v5_gn_9_116960 Lactuca sativa
Manes.03G069500 Manihot esculenta
Manes.03G070216 Manihot esculenta
Mapoly0032s0002 Marchantia polymorpha
Mapoly0095s0011 Marchantia polymorpha
MBI19_g43313_MAGBIO Magnolia biondii
MCO09G025 Micromonas commoda
MD04G1237800 Malus domestica
MD12G1256000 Malus domestica
Medtr2g047908 Medicago truncatula
MELO3C007016.2 Cucumis melo
Migut.H01305 Erythranthe guttata
Nitab4.5_0000378g0090 Nicotiana tabacum
Nitab4.5_0000378g0100 Nicotiana tabacum
Nitab4.5_0001298g0050 Nicotiana tabacum
Nitab4.5_0001298g0060 Nicotiana tabacum
Nitab4.5_0001298g0070 Nicotiana tabacum
Nitab4.5_0002444g0030 Nicotiana tabacum
Nitab4.5_0003644g0080 Nicotiana tabacum
Nitab4.5_0003773g0070 Nicotiana tabacum
Nitab4.5_0010415g0040 Nicotiana tabacum
Nitab4.5_0025882g0010 Nicotiana tabacum
Nn4g25046 Nelumbo nucifera
Oeu001605.1 Olea europaea
Oeu008973.2 Olea europaea
Oeu018810.1 Olea europaea
Oeu051246.1 Olea europaea
Os04g0212200 Oryza sativa ssp. japonica
Peaxi162Scf00267g00085 Petunia axillaris
Peaxi162Scf00267g00817 Petunia axillaris
Phvul.009G217900 Phaseolus vulgaris
Potri.001G442900 Populus trichocarpa
Potri.011G154000 Populus trichocarpa
Pp3c11_18680 Physcomitrium patens
Pp3c7_5040 Physcomitrium patens
PRCOL_00001035 Prasinoderma coloniale
Prupe.6G356900 Prunus persica
Psat0s4071g0040 Pisum sativum
PSO063G1971 Papaver somniferum
PSO170G3331 Papaver somniferum
QL05p065371 Quercus lobata
QL08p057617 Quercus lobata
RcHm_v2.0_Chr2g0113461 Rosa chinensis
RcHm_v2.0_Chr3g0448451 Rosa chinensis
RcHm_v2.0_Chr7g0240301 Rosa chinensis
Rhsim13G0126800 Rhododendron simsii
Sabra11G0145500 Salix brachista
Sabra16G0299500 Salix brachista
Sabra16G0299600 Salix brachista
Sabra16G0301200 Salix brachista
SalBow7G3129 Salvia bowleyana
Sc13g0010770 Simmondsia chinensis
Sed0000926 Sechium edule
Sed0003597 Sechium edule
SEGI_05968 Sequoiadendron giganteum
SEGI_08137 Sequoiadendron giganteum
SEGI_21626 Sequoiadendron giganteum
SEGI_29135 Sequoiadendron giganteum
SGA_v2.0_scaffold341G49384 Striga asiatica
SHI31584 Sapria himalayana
SHI31587 Sapria himalayana
SHI31588 Sapria himalayana
SHI31589 Sapria himalayana
SHI31590 Sapria himalayana
SHI31592 Sapria himalayana
SMO137G0352 Selaginella moellendorffii
Solyc02g030100.4 Solanum lycopersicum
Solyc02g030110.2 Solanum lycopersicum
Sopen02g009430 Solanum pennellii
Sopen02g018780 Solanum pennellii
Sp7g18100 Schrenkiella parvula
TAR624G0033 Trochodendron aralioides
TAR624G0988 Trochodendron aralioides
TAR626G0933 Trochodendron aralioides
THA.LOC104812894 Tarenaya hassleriana
Thecc.06G002800 Theobroma cacao
Thhalv10024300m.g Eutrema salsugineum
TPR.G22668 Trifolium pratense
TWI15G0246 Tripterygium wilfordii
TWI38G1754 Tripterygium wilfordii
unitig_21.g20207 Utricularia gibba
vmacro03482 Vaccinium macrocarpon
vmacro16031 Vaccinium macrocarpon
vmacro19556 Vaccinium macrocarpon
vmacro19693 Vaccinium macrocarpon
vmacro19694 Vaccinium macrocarpon
Zm00001eb088370 Zea mays
Zm00001eb419780 Zea mays

User provided reference genes

Program Settings