Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p28360 Brassica napus
A06p47300 Brassica napus
A09p21050 Brassica napus
Aa31LG6G3040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1925 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3152 Anthoceros agrestis
Actinidia05643 Actinidia chinensis
Actinidia16555 Actinidia chinensis
Ah.12g058540 Amaranthus hybridus
AL7G33170 Arabidopsis lyrata
AL8G15580 Arabidopsis lyrata
Aqoxy4G02656 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FXY2MK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R134T8 Arachis hypogaea
AT4G20980 Arabidopsis thaliana
AT5G44320 Arabidopsis thaliana
ATR0665G315 Amborella trichopoda
ATR0665G336 Amborella trichopoda
Atru.chr10.1865 Acer truncatum
AUR62015260 Chenopodium quinoa
AUR62018061 Chenopodium quinoa
AUR62019528 Chenopodium quinoa
AUR62036107 Chenopodium quinoa
BcaB07g30952 Brassica carinata
BcaB07g30957 Brassica carinata
BcaC03g16652 Brassica carinata
BcaC04g21840 Brassica carinata
BcaC06g31627 Brassica carinata
BcaC06g31628 Brassica carinata
BcaC06g34569 Brassica carinata
BolC7t43234H Brassica oleracea
BolC9t55567H Brassica oleracea
BraA02t07873Z Brassica rapa
BraA06t27601Z Brassica rapa
BraA09t37704Z Brassica rapa
C02p44940 Brassica napus
C07p27040 Brassica napus
C09p26790 Brassica napus
CAN.G320.7 Capsicum annuum
CAN.G413.27 Capsicum annuum
CAN.G529.1 Capsicum annuum
CANSAT35G1561 Cannabis sativa
CARHR178810 Cardamine hirsuta
CARHR227530 Cardamine hirsuta
Carub.0007s2046 Capsella rubella
Carub.0008s0415 Capsella rubella
Ca_00342_v3 Cicer arietinum L.
CBR_g20021 Chara braunii
CBR_g8049 Chara braunii
Cc02_g13470 Coffea canephora
CDE06G2702 Ceratophyllum demersum
CDE07G0331 Ceratophyllum demersum
Cfa014799 Carpinus fangiana
Cfa024070 Carpinus fangiana
Ciclev10017475m.g Citrus clementina
CiPaw.09G060800 Carya illinoinensis
CiPaw.10G049800 Carya illinoinensis
ClCG01G025340 Citrullus lanatus
COL.COLO4_31457 Corchorus olitorius
Cpa.g.sc27.36 Carica papaya
Cre05.g242300 Chlamydomonas reinhardtii
CsaV3_6G052600 Cucumis sativus L.
CSS0021711 Camellia sinensis var. sinensis
CSS0026003 Camellia sinensis var. sinensis
CSS0038024 Camellia sinensis var. sinensis
DCAR_024898 Daucus carota
Dinv13172 Davidia involucrata
Dinv17321 Davidia involucrata
Dinv40570 Davidia involucrata
Duzib192G0865 Durio zibethinus
Duzib235G0380 Durio zibethinus
ECA248G3601 Erigeron canadensis
EL10Ac8g19153 Beta vulgaris
Eucgr.D00614 Eucalyptus grandis
FAN04G1437 Fragaria x ananassa
FAN08G1211 Fragaria x ananassa
FAN11G2816 Fragaria x ananassa
FAN13G0993 Fragaria x ananassa
FAN16G2584 Fragaria x ananassa
FAN18G0389 Fragaria x ananassa
FAN21G3883 Fragaria x ananassa
FvH4_3g37950 Fragaria vesca
FvH4_5g27490 Fragaria vesca
Glyma.13G238200 Glycine max
Glyma.15G075100 Glycine max
Gohir.A05G161200 Gossypium hirsutum
Gohir.A06G128300 Gossypium hirsutum
Gohir.A10G026600 Gossypium hirsutum
Gohir.D05G163900 Gossypium hirsutum
Gohir.D06G132300 Gossypium hirsutum
Gohir.D10G027200 Gossypium hirsutum
Gorai.009G169000 Gossypium raimondii
Gorai.010G154200 Gossypium raimondii
Gorai.011G028500 Gossypium raimondii
GSVIVG01002790001 Vitis vinifera
HanXRQChr01g0003861 Helianthus annuus
HanXRQChr16g0516221 Helianthus annuus
Haze_06432 Corylus avellana
Haze_26349 Corylus avellana
Hma1.2p1_0673F.1_g201280 Hydrangea macrophylla
Hma1.2p1_1222F.1_g268180 Hydrangea macrophylla
HPP92_010058 Vanilla planifolia
HPP92_010059 Vanilla planifolia
Hund23769 Selenicereus undatus
Lalb_Chr15g0089781 Lupinus albus
Lalb_Chr20g0121821 Lupinus albus
Lj1A1204T32 Lonicera japonica
Lj6g0027126 Lotus japonicus
Lsat_1_v5_gn_1_126340 Lactuca sativa
Lsat_1_v5_gn_2_53660 Lactuca sativa
Lsat_1_v5_gn_4_114361 Lactuca sativa
Lsat_1_v5_gn_4_141040 Lactuca sativa
Lsat_1_v5_gn_4_53760 Lactuca sativa
Lsat_1_v5_gn_4_53780 Lactuca sativa
Lsat_1_v5_gn_6_19961 Lactuca sativa
Lsat_1_v5_gn_8_162420 Lactuca sativa
Lsat_1_v5_gn_8_58000 Lactuca sativa
Manes.04G137900 Manihot esculenta
Manes.11G028400 Manihot esculenta
Mapoly0112s0008 Marchantia polymorpha
MBI10_g03527_MAGBIO Magnolia biondii
MCO16G041 Micromonas commoda
MD05G1338100 Malus domestica
Medtr2g013930 Medicago truncatula
Medtr7g111950 Medicago truncatula
Migut.H01483 Erythranthe guttata
Migut.M01135 Erythranthe guttata
MSTRG.15878 Avicennia marina
Nitab4.5_0009438g0010 Nicotiana tabacum
Nitab4.5_0011879g0010 Nicotiana tabacum
Nn1g04114 Nelumbo nucifera
Nn1g06510 Nelumbo nucifera
Os05g0566500 Oryza sativa ssp. japonica
Peaxi162Scf00048g00153 Petunia axillaris
PGR042G2561 Punica granatum
PGSC0003DMG400029694 Solanum tuberosum
Phvul.006G184500 Phaseolus vulgaris
Potri.004G044500 Populus trichocarpa
Potri.011G053500 Populus trichocarpa
Pp3c12_8550 Physcomitrium patens
Pp3c13_8400 Physcomitrium patens
Pp3c3_3440 Physcomitrium patens
PRCOL_00004325 Prasinoderma coloniale
Prupe.4G048700 Prunus persica
Psat1g204440 Pisum sativum
Psat3g013320 Pisum sativum
PSO210G2017 Papaver somniferum
PSO210G2817 Papaver somniferum
PSO541G6261 Papaver somniferum
PSO675G1395 Papaver somniferum
QL06p052924 Quercus lobata
QL06p053406 Quercus lobata
RcHm_v2.0_Chr5g0048541 Rosa chinensis
Rhsim02G0172600 Rhododendron simsii
Rhsim13G0138500 Rhododendron simsii
Sabra04G0027700 Salix brachista
Sabra11G0037300 Salix brachista
Sc17g0006150 Simmondsia chinensis
Sed0013036 Sechium edule
Sed0021745 Sechium edule
SEGI_11253 Sequoiadendron giganteum
SEGI_12249 Sequoiadendron giganteum
SEGI_13937 Sequoiadendron giganteum
SEGI_18110 Sequoiadendron giganteum
SEGI_19488 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37637 Striga asiatica
SGA_v2.0_scaffold16G07757 Striga asiatica
SGA_v2.0_scaffold49G18296 Striga asiatica
SHI13762 Sapria himalayana
SMO169G0124 Selaginella moellendorffii
SMO298G0032 Selaginella moellendorffii
Solyc02g078120.2 Solanum lycopersicum
Sopen02g022950 Solanum pennellii
Sp2g09160 Schrenkiella parvula
Sp7g19050 Schrenkiella parvula
TAR375G0365 Trochodendron aralioides
TAR626G0815 Trochodendron aralioides
TAR627G1095 Trochodendron aralioides
THA.LOC104812284 Tarenaya hassleriana
THA.LOC104812939 Tarenaya hassleriana
Thecc.06G186000 Theobroma cacao
Thhalv10003390m.g Eutrema salsugineum
TPR.G16497 Trifolium pratense
TPR.G1669 Trifolium pratense
TWI38G1181 Tripterygium wilfordii
TWI38G1399 Tripterygium wilfordii
unitig_22.g5701 Utricularia gibba
unitig_22.g5702 Utricularia gibba
unitig_8.g3642 Utricularia gibba
unitig_8.g3643 Utricularia gibba
vmacro02645 Vaccinium macrocarpon
vmacro03873 Vaccinium macrocarpon
vmacro03877 Vaccinium macrocarpon
VMungo0540G0515 Vigna mungo
Zm00001eb157540 Zea mays
Zm00001eb296070 Zea mays

User provided reference genes

Program Settings