Gene: AT4G20980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G20980
  • Transcript Identifier AT4G20980.4
  • Gene Type Coding gene
  • Location Chr4 : 11216997-11218772 : positive

Gene Family Information

  • ID HOM05D003480
  • #Genes/#Species 196/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G20980.4
  • uniprot P56820

Descriptions

  • Description Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
  • Computational description Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT5G44320.1); Has 517 Blast hits to 503 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 127; Plants - 75; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
  • Computational description Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT5G44320.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0006413
IBA
Gene Ontologytranslational initiation1
GO:0006412
IEA
GOA Databasetranslation
GO:0002191
IEA
GOA Databasecap-dependent translational initiation
GO:0002183
IEA
GOA Databasecytoplasmic translational initiation
GO:0001732
IEA
GOA Databaseformation of cytoplasmic translation initiation complex

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0003743
IBA
Gene Ontologytranslation initiation factor activity1
GO:0003743
IEA
InterProtranslation initiation factor activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0098808
IEA
GOA DatabasemRNA cap binding
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016282
IEA
GOA Databaseeukaryotic 43S preinitiation complex
GO:0005852
IEA
GOA Databaseeukaryotic translation initiation factor 3 complex
GO:0005852
IBA
Gene Ontologyeukaryotic translation initiation factor 3 complex1
GO:0005852
IEA
InterProeukaryotic translation initiation factor 3 complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005634
ISM
Gene Ontologynucleus
GO:0033290
IEA
GOA Databaseeukaryotic 48S preinitiation complex
GO:0005829
HDA
Gene Ontologycytosol3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007783 Eukaryotic translation initiation factor 3 subunit D
Mapman id Description
17.4.1.3.4 Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3d