Gene: Pp3c3_3440
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c3_3440
- Transcript Identifier Pp3c3_3440V3.1
- Gene Type Coding gene
- Location Chr03 : 1986077-1988175 : positive
Gene Family Information
- ID HOM05D003480
- #Genes/#Species 196/97
- Phylogenetic origin
- ID ORTHO05D004425
- #Genes/#Species 181/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c3_3440V3.1
- pacid 32942543
- alias Phpat.003G015600
- alias Phypa_22044
- alias Pp1s1_543V6
- uniprot A0A2K1KT80
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001732 | IEA | GOA Database | formation of cytoplasmic translation initiation complex | |
| GO:0006413 | IBA IEA | GOA Database | translational initiation | |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0002191 | IEA | GOA Database | cap-dependent translational initiation | |
| GO:0002183 | IEA | GOA Database | cytoplasmic translational initiation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G44320 |
| GO:0003743 | IBA IEA | GOA Database | translation initiation factor activity | |
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0098808 | IEA | GOA Database | mRNA cap binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G44320 |
| GO:0005852 | IBA IEA | GOA Database | eukaryotic translation initiation factor 3 complex | |
| GO:0005852 | IEA | InterPro | eukaryotic translation initiation factor 3 complex | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0016282 | IEA | GOA Database | eukaryotic 43S preinitiation complex | |
| GO:0033290 | IEA | GOA Database | eukaryotic 48S preinitiation complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007783 | Eukaryotic translation initiation factor 3 subunit D |
| Mapman id | Description |
|---|---|
| 17.4.1.3.4 | Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3d |