Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p01680 Brassica napus
A05p38680 Brassica napus
A10p31650 Brassica napus
Aa31LG11G5300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.931 Anthoceros agrestis
Actinidia34789 Actinidia chinensis
Actinidia38891 Actinidia chinensis
AL6G14070 Arabidopsis lyrata
Aqoxy1G01069 Aquilegia oxysepala
Aqoxy2G01633 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2WVS1U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.68AZQV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G474U2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L2B5VZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XAYS0A Arachis hypogaea
AT5G04430 Arabidopsis thaliana
ATR0043G023 Amborella trichopoda
ATR0043G036 Amborella trichopoda
Atru.chr12.903 Acer truncatum
AUR62041269 Chenopodium quinoa
AUR62041795 Chenopodium quinoa
BcaB01g05898 Brassica carinata
BcaB05g21762 Brassica carinata
BcaC03g12945 Brassica carinata
BcaC05g29458 Brassica carinata
BcaC06g32151 Brassica carinata
BcaNung04621 Brassica carinata
BcaNung04928 Brassica carinata
BolC2t06150H Brassica oleracea
BolC3t12758H Brassica oleracea
BolC5t34412H Brassica oleracea
BolC9t59976H Brassica oleracea
BraA02t04812Z Brassica rapa
BraA03t09543Z Brassica rapa
BraA05t22659Z Brassica rapa
BraA10t45211Z Brassica rapa
C02p01930 Brassica napus
C03p02050 Brassica napus
C05p57550 Brassica napus
C09p72320 Brassica napus
CAN.G135.24 Capsicum annuum
CAN.G1891.4 Capsicum annuum
CANSAT56G2777 Cannabis sativa
CARHR208830 Cardamine hirsuta
Carub.0006s0337 Capsella rubella
Ca_10441_v3 Cicer arietinum L.
Ca_10454_v3 Cicer arietinum L.
Ca_16774_v3 Cicer arietinum L.
Ca_19637_v3 Cicer arietinum L.
CBR_g30931 Chara braunii
Cc02_g10580 Coffea canephora
CDE03G0484 Ceratophyllum demersum
CDE06G1707 Ceratophyllum demersum
CDE08G1488 Ceratophyllum demersum
Cfa001777 Carpinus fangiana
Cfa026009 Carpinus fangiana
Ciclev10032050m.g Citrus clementina
CiPaw.01G265300 Carya illinoinensis
CiPaw.02G170100 Carya illinoinensis
ClCG05G021420 Citrullus lanatus
ClCG08G004090 Citrullus lanatus
ClCG11G007340 Citrullus lanatus
COL.COLO4_02905 Corchorus olitorius
Cpa.g.sc53.166 Carica papaya
Cre08.g379100 Chlamydomonas reinhardtii
Cre16.g672750 Chlamydomonas reinhardtii
CsaV3_5G035820 Cucumis sativus L.
CSS0001382 Camellia sinensis var. sinensis
CSS0030750 Camellia sinensis var. sinensis
DCAR_006384 Daucus carota
DCAR_019061 Daucus carota
Dinv31260 Davidia involucrata
Dinv31261 Davidia involucrata
Dinv31262 Davidia involucrata
Dinv36360 Davidia involucrata
Duzib114G0852 Durio zibethinus
Duzib128G1656 Durio zibethinus
ECA233G3917 Erigeron canadensis
EL10As9g23938 Beta vulgaris
Eucgr.G02737 Eucalyptus grandis
FAN01G0566 Fragaria x ananassa
FAN03G1234 Fragaria x ananassa
FAN06G2771 Fragaria x ananassa
FAN10G3468 Fragaria x ananassa
FvH4_7g06600 Fragaria vesca
Glyma.10G198300 Glycine max
Glyma.20G191700 Glycine max
Gohir.A05G291200 Gossypium hirsutum
Gohir.A06G168900 Gossypium hirsutum
Gohir.A10G200400 Gossypium hirsutum
Gohir.D05G292300 Gossypium hirsutum
Gohir.D06G176400 Gossypium hirsutum
Gohir.D10G208300 Gossypium hirsutum
Gorai.009G308500 Gossypium raimondii
Gorai.010G207600 Gossypium raimondii
Gorai.011G234000 Gossypium raimondii
GSVIVG01016165001 Vitis vinifera
HanXRQChr08g0218311 Helianthus annuus
HanXRQChr14g0456171 Helianthus annuus
Haze_16775 Corylus avellana
Haze_27120 Corylus avellana
Hma1.2p1_1009F.1_g247280 Hydrangea macrophylla
HPP92_014722 Vanilla planifolia
HPP92_020767 Vanilla planifolia
Hund22304 Selenicereus undatus
Lalb_Chr01g0010281 Lupinus albus
Lalb_Chr02g0151111 Lupinus albus
Lalb_Chr06g0170031 Lupinus albus
Lalb_Chr19g0129371 Lupinus albus
Lj3C935G7 Lonicera japonica
Lj5g0011720 Lotus japonicus
Lsat_1_v5_gn_2_103201 Lactuca sativa
Lsat_1_v5_gn_8_17860 Lactuca sativa
Manes.11G087166 Manihot esculenta
Mapoly0060s0047 Marchantia polymorpha
MBI17_g34404_MAGBIO Magnolia biondii
MBI17_g44462_MAGBIO Magnolia biondii
MCO01G249 Micromonas commoda
MD02G1237900 Malus domestica
MD02G1241800 Malus domestica
MD07G1074100 Malus domestica
Medtr1g090773 Medicago truncatula
MELO3C012385.2 Cucumis melo
Migut.F01911 Erythranthe guttata
MSTRG.27501 Avicennia marina
MSTRG.8120 Avicennia marina
Nitab4.5_0000096g0210 Nicotiana tabacum
Nitab4.5_0000107g0190 Nicotiana tabacum
Nitab4.5_0002692g0090 Nicotiana tabacum
Nitab4.5_0004047g0030 Nicotiana tabacum
Nitab4.5_0004047g0040 Nicotiana tabacum
Nitab4.5_0008349g0010 Nicotiana tabacum
Nitab4.5_0008349g0020 Nicotiana tabacum
Nitab4.5_0009159g0020 Nicotiana tabacum
Nitab4.5_0010505g0010 Nicotiana tabacum
Nn3g19092 Nelumbo nucifera
Nn6g35202 Nelumbo nucifera
Oeu015056.1 Olea europaea
Oeu060276.1 Olea europaea
Oeu060277.5 Olea europaea
Os01g0533450 Oryza sativa ssp. japonica
Os02g0822300 Oryza sativa ssp. japonica
Peaxi162Scf00253g00318 Petunia axillaris
Peaxi162Scf00409g00218 Petunia axillaris
PGR142G3968 Punica granatum
PGSC0003DMG400023482 Solanum tuberosum
PGSC0003DMG400027335 Solanum tuberosum
Phvul.007G141100 Phaseolus vulgaris
Potri.008G030700 Populus trichocarpa
Potri.010G230500 Populus trichocarpa
PRCOL_00000948 Prasinoderma coloniale
Prupe.2G093900 Prunus persica
Psat6g173360 Pisum sativum
PSO063G2817 Papaver somniferum
PSO339G2738 Papaver somniferum
PSO339G4614 Papaver somniferum
PSO801G0704 Papaver somniferum
QL08p053096 Quercus lobata
RcHm_v2.0_Chr1g0335271 Rosa chinensis
Rhsim09G0145400 Rhododendron simsii
Sabra08G0020500 Salix brachista
Sabra10G0178800 Salix brachista
SalBow4G0167 Salvia bowleyana
SalBow6G0311 Salvia bowleyana
SalBow6G4419 Salvia bowleyana
Sc09g0005840 Simmondsia chinensis
Sed0007053 Sechium edule
Sed0013139 Sechium edule
SEGI_38080 Sequoiadendron giganteum
SGA_v2.0_scaffold101G29793 Striga asiatica
SGA_v2.0_scaffold62G21367 Striga asiatica
SMO340G0186 Selaginella moellendorffii
SMO347G0528 Selaginella moellendorffii
Solyc05g055450.3 Solanum lycopersicum
Solyc09g150121.1 Solanum lycopersicum
Solyc11g007940.2 Solanum lycopersicum
Sopen05g033900 Solanum pennellii
Sopen11g003810 Solanum pennellii
Sp3g08770 Schrenkiella parvula
Sp6g38310 Schrenkiella parvula
TAR369G0057 Trochodendron aralioides
TAR623G1080 Trochodendron aralioides
TAR633G1158 Trochodendron aralioides
THA.LOC104816445 Tarenaya hassleriana
THA.LOC104823197 Tarenaya hassleriana
THA.LOC104826969 Tarenaya hassleriana
Thecc.10G089500 Theobroma cacao
Thhalv10014068m.g Eutrema salsugineum
TPR.G37741 Trifolium pratense
TWI15G0156 Tripterygium wilfordii
TWI38G0253 Tripterygium wilfordii
TWI63G1099 Tripterygium wilfordii
unitig_736.g22325 Utricularia gibba
unitig_899.g15058 Utricularia gibba
vmacro10262 Vaccinium macrocarpon
VMungo0720G0843 Vigna mungo
Zm00001eb191030 Zea mays
Zm00001eb259230 Zea mays

User provided reference genes

Program Settings