Gene: Sopen11g003810
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g003810
- Transcript Identifier Sopen11g003810.1
- Gene Type Coding gene
- Location Spenn-ch11 : 2313644-2320018 : positive
Gene Family Information
- ID HOM05D003445
- #Genes/#Species 198/97
- Phylogenetic origin
- ID ORTHO05D004114
- #Genes/#Species 191/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g003810.1
Descriptions
- Description Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication. | binding to TOMV RNA 1L (long form) (BTR1L) | CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup , K Homology , K Homology, type 1 | BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046719 | ISO | PLAZA Integrative Orthology | regulation by virus of viral protein levels in host cell | AT5G04430 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G04430 |
| GO:0003727 | ISO | PLAZA Integrative Orthology | single-stranded RNA binding | AT5G04430 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G04430 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 26.11.3.2 | External stimuli response.virus.virus infection.resistance factor (BTR1) |