Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15460 Brassica napus
Aa31sc12G150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2269 Anthoceros agrestis
Actinidia07743 Actinidia chinensis
Actinidia07752 Actinidia chinensis
Actinidia30181 Actinidia chinensis
Actinidia30182 Actinidia chinensis
Ah.12g061010 Amaranthus hybridus
Ah.12g061020 Amaranthus hybridus
Ah.12g061030 Amaranthus hybridus
arahy.Tifrunner.gnm1.ann1.2XHE7W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KJ79M0 Arachis hypogaea
AT1G68890 Arabidopsis thaliana
ATR0691G173 Amborella trichopoda
Atru.chr11.1518 Acer truncatum
AUR62003033 Chenopodium quinoa
AUR62003034 Chenopodium quinoa
AUR62007840 Chenopodium quinoa
AUR62028257 Chenopodium quinoa
BcaB05g24430 Brassica carinata
BcaC03g15011 Brassica carinata
BolC2t08622H Brassica oleracea
BraA02t06607Z Brassica rapa
C02p25570 Brassica napus
CAN.G263.1 Capsicum annuum
CAN.G263.2 Capsicum annuum
CAN.G822.4 Capsicum annuum
CANSAT64G0670 Cannabis sativa
CARHR061750 Cardamine hirsuta
Carub.0002s1550 Capsella rubella
Carub.0002s1551 Capsella rubella
Carub.0002s1552 Capsella rubella
Ca_22508_v3 Cicer arietinum L.
Ca_22509_v3 Cicer arietinum L.
Ca_22511_v3 Cicer arietinum L.
Cc11_g11300 Coffea canephora
Cc11_g11320 Coffea canephora
Cc11_g11330 Coffea canephora
CDE02G1987 Ceratophyllum demersum
CDE02G4531 Ceratophyllum demersum
Cfa008813 Carpinus fangiana
Cfa008818 Carpinus fangiana
Cfa008819 Carpinus fangiana
Ciclev10030492m.g Citrus clementina
CiPaw.05G119100 Carya illinoinensis
ClCG05G023390 Citrullus lanatus
COL.COLO4_27762 Corchorus olitorius
Cpa.g.sc179.55 Carica papaya
Cpa.g.sc2514.1 Carica papaya
Cpa.g.sc2514.2 Carica papaya
Cpa.g.sc48.236 Carica papaya
Cpa.g.sc53.1 Carica papaya
Cpa.g.sc570.4 Carica papaya
Cpa.g.sc62.173 Carica papaya
Cpa.g.sc878.3 Carica papaya
Cre16.g659050 Chlamydomonas reinhardtii
CsaV3_5G033620 Cucumis sativus L.
CSS0002113 Camellia sinensis var. sinensis
CSS0008902 Camellia sinensis var. sinensis
CSS0014289 Camellia sinensis var. sinensis
CSS0041395 Camellia sinensis var. sinensis
DCAR_023734 Daucus carota
Dinv16579 Davidia involucrata
Dinv16582 Davidia involucrata
Duzib251G0072 Durio zibethinus
ECA234G3211 Erigeron canadensis
EL10Ac6g14628 Beta vulgaris
Eucgr.G02401 Eucalyptus grandis
Eucgr.G02402 Eucalyptus grandis
FAN07G2974 Fragaria x ananassa
FAN12G2600 Fragaria x ananassa
FAN17G0827 Fragaria x ananassa
FAN22G1421 Fragaria x ananassa
FvH4_4g28800 Fragaria vesca
Glyma.01G000100 Glycine max
Glyma.01G000248 Glycine max
Glyma.01G000322 Glycine max
Glyma.03G011400 Glycine max
Glyma.06G325402 Glycine max
Glyma.06G325566 Glycine max
Glyma.08G313532 Glycine max
Glyma.08G368001 Glycine max
Glyma.08G368201 Glycine max
Glyma.10G000050 Glycine max
Glyma.13G107000 Glycine max
Glyma.15G276800 Glycine max
Glyma.15G277066 Glycine max
Glyma.15G277502 Glycine max
Glyma.17G262200 Glycine max
Glyma.U045802 Glycine max
Gohir.A03G107400 Gossypium hirsutum
Gohir.A03G107450 Gossypium hirsutum
Gohir.A13G089245 Gossypium hirsutum
Gohir.D02G132466 Gossypium hirsutum
Gohir.D02G132532 Gossypium hirsutum
Gorai.005G148400 Gossypium raimondii
GSVIVG01010139001 Vitis vinifera
GSVIVG01010141001 Vitis vinifera
GSVIVG01010142001 Vitis vinifera
GSVIVG01010143001 Vitis vinifera
HanXRQChr16g0528311 Helianthus annuus
Haze_11830 Corylus avellana
Hma1.2p1_0021F.1_g014340 Hydrangea macrophylla
Hma1.2p1_0762F.1_g214430 Hydrangea macrophylla
Hma1.2p1_0762F.1_g214440 Hydrangea macrophylla
Hma1.2p1_0762F.1_g214450 Hydrangea macrophylla
HPP92_019403 Vanilla planifolia
HPP92_019404 Vanilla planifolia
HPP92_019426 Vanilla planifolia
HPP92_019427 Vanilla planifolia
HPP92_019428 Vanilla planifolia
Hund25139 Selenicereus undatus
Lalb_Chr16g0392011 Lupinus albus
Lalb_Chr16g0392021 Lupinus albus
Lalb_Chr16g0392031 Lupinus albus
Lj3C1025G4 Lonicera japonica
Lj4g0011234 Lotus japonicus
Lsat_1_v5_gn_4_21341 Lactuca sativa
Manes.14G092500 Manihot esculenta
Mapoly0195s0004 Marchantia polymorpha
MBI04_g26975_MAGBIO Magnolia biondii
MBI14_g11750_MAGBIO Magnolia biondii
MCO05G676 Micromonas commoda
MD13G1054200 Malus domestica
MD13G1054300 Malus domestica
MD16G1052600 Malus domestica
Medtr8g069840 Medicago truncatula
MELO3C012178.2 Cucumis melo
Migut.L01140 Erythranthe guttata
MSTRG.795 Avicennia marina
Nitab4.5_0000149g0210 Nicotiana tabacum
Nitab4.5_0000149g0230 Nicotiana tabacum
Nitab4.5_0000591g0090 Nicotiana tabacum
Nitab4.5_0000591g0100 Nicotiana tabacum
Nitab4.5_0002491g0050 Nicotiana tabacum
Nn4g23587 Nelumbo nucifera
Nn4g23588 Nelumbo nucifera
Oeu027415.2 Olea europaea
Os02g0581400 Oryza sativa ssp. japonica
Os02g0581500 Oryza sativa ssp. japonica
Peaxi162Scf00396g01316 Petunia axillaris
Peaxi162Scf00396g01321 Petunia axillaris
Peaxi162Scf00396g01322 Petunia axillaris
PGR119G1138 Punica granatum
PGSC0003DMG400001917 Solanum tuberosum
Phvul.005G022900 Phaseolus vulgaris
Potri.010G135500 Populus trichocarpa
Pp3c9_10620 Physcomitrium patens
PRCOL_00004179 Prasinoderma coloniale
Prupe.1G298000 Prunus persica
Psat0s5438g0040 Pisum sativum
Psat1g137120 Pisum sativum
Psat2g033000 Pisum sativum
Psat2g052840 Pisum sativum
Psat2g052880 Pisum sativum
Psat2g135600 Pisum sativum
Psat4g082840 Pisum sativum
Psat4g113480 Pisum sativum
Psat4g113520 Pisum sativum
Psat7g028040 Pisum sativum
Psat7g103520 Pisum sativum
PSO017G4740 Papaver somniferum
PSO478G2917 Papaver somniferum
QL03p047145 Quercus lobata
QL03p047161 Quercus lobata
QL03p047172 Quercus lobata
QL03p047190 Quercus lobata
RcHm_v2.0_Chr4g0436931 Rosa chinensis
RcHm_v2.0_Chr4g0436941 Rosa chinensis
Rhsim09G0118400 Rhododendron simsii
Rhsim13G0143400 Rhododendron simsii
Rhsim13G0143500 Rhododendron simsii
Sabra10G0104000 Salix brachista
Sabra10G0104100 Salix brachista
SalBow8G3833 Salvia bowleyana
Sc04g0007220 Simmondsia chinensis
Sed0018972 Sechium edule
SEGI_27375 Sequoiadendron giganteum
SEGI_33974 Sequoiadendron giganteum
SEGI_34733 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07841 Striga asiatica
SMO270G0066 Selaginella moellendorffii
Solyc04g005180.4 Solanum lycopersicum
Solyc04g005190.2 Solanum lycopersicum
Solyc04g005200.4 Solanum lycopersicum
Sopen04g001190 Solanum pennellii
Sp5g24020 Schrenkiella parvula
TAR629G1044 Trochodendron aralioides
THA.LOC104821983 Tarenaya hassleriana
Thecc.02G318900 Theobroma cacao
Thhalv10017999m.g Eutrema salsugineum
TWI75G0189 Tripterygium wilfordii
unitig_699.g19901 Utricularia gibba
vmacro10455 Vaccinium macrocarpon
VMungo1080G0040 Vigna mungo
VMungo1080G0632 Vigna mungo
Zm00001eb245360 Zea mays
Zm00001eb245370 Zea mays

User provided reference genes

Program Settings