Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01970 Brassica napus
A03p06010 Brassica napus
Aa31LG11G7380 Aethionema arabicum
Aa31LG8G12390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.461 Anthoceros agrestis
Actinidia06245 Actinidia chinensis
Actinidia08407 Actinidia chinensis
Actinidia10165 Actinidia chinensis
Actinidia10170 Actinidia chinensis
Actinidia10171 Actinidia chinensis
Actinidia13019 Actinidia chinensis
Actinidia19465 Actinidia chinensis
Ah.10g030390 Amaranthus hybridus
AL6G24100 Arabidopsis lyrata
Aqoxy2G01592 Aquilegia oxysepala
Aqoxy2G01593 Aquilegia oxysepala
Aqoxy4G02704 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.07MYST Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JYS69T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8HZNX Arachis hypogaea
AT5G13480 Arabidopsis thaliana
ATR0568G096 Amborella trichopoda
ATR0745G072 Amborella trichopoda
Atru.chr12.1360 Acer truncatum
AUR62026878 Chenopodium quinoa
AUR62037187 Chenopodium quinoa
AUR62037192 Chenopodium quinoa
AUR62037193 Chenopodium quinoa
BcaB01g05356 Brassica carinata
BcaC05g28071 Brassica carinata
BcaNung01149 Brassica carinata
BcaNung01887 Brassica carinata
BolC2t06560H Brassica oleracea
BolC3t13203H Brassica oleracea
BolC3t16605H Brassica oleracea
BraA02t05170Z Brassica rapa
BraA03t09938Z Brassica rapa
C02p06160 Brassica napus
C03p07050 Brassica napus
C03p43350 Brassica napus
C05p40950 Brassica napus
C07p49630 Brassica napus
CAN.G730.9 Capsicum annuum
CANSAT25G0328 Cannabis sativa
CARHR199960 Cardamine hirsuta
Carub.0006s1164 Capsella rubella
Ca_23942_v3 Cicer arietinum L.
Ca_23943_v3 Cicer arietinum L.
CBR_g16799 Chara braunii
CBR_g22487 Chara braunii
Cc00_g06910 Coffea canephora
CDE04G3459 Ceratophyllum demersum
Cfa010885 Carpinus fangiana
Ciclev10004445m.g Citrus clementina
CiPaw.13G012800 Carya illinoinensis
CiPaw.14G007200 Carya illinoinensis
ClCG01G007460 Citrullus lanatus
Cre06.g251951 Chlamydomonas reinhardtii
CsaV3_5G024420 Cucumis sativus L.
CSS0014544 Camellia sinensis var. sinensis
DCAR_025391 Daucus carota
DCAR_031832 Daucus carota
DCAR_031833 Daucus carota
Dinv09276 Davidia involucrata
Dinv32032 Davidia involucrata
Duzib106G0689 Durio zibethinus
Duzib114G0281 Durio zibethinus
ECA248G2072 Erigeron canadensis
EL10Ac2g02817 Beta vulgaris
Eucgr.G03238 Eucalyptus grandis
FAN03G3378 Fragaria x ananassa
FAN06G0645 Fragaria x ananassa
FAN06G4607 Fragaria x ananassa
FAN09G0535 Fragaria x ananassa
FAN09G3514 Fragaria x ananassa
FAN11G1841 Fragaria x ananassa
FAN11G4032 Fragaria x ananassa
FAN13G0969 Fragaria x ananassa
FAN14G3483 Fragaria x ananassa
FAN14G5538 Fragaria x ananassa
FAN16G0070 Fragaria x ananassa
FAN16G0123 Fragaria x ananassa
FAN18G4486 Fragaria x ananassa
FAN19G0629 Fragaria x ananassa
FAN19G1643 Fragaria x ananassa
FAN19G2386 Fragaria x ananassa
FAN19G2649 Fragaria x ananassa
FAN23G2061 Fragaria x ananassa
FAN23G2758 Fragaria x ananassa
FAN26G1924 Fragaria x ananassa
FAN27G1752 Fragaria x ananassa
FAN28G2604 Fragaria x ananassa
FvH4_4g16141 Fragaria vesca
FvH4_5g25490 Fragaria vesca
FvH4_5g25550 Fragaria vesca
FvH4_6g22190 Fragaria vesca
FvH4_6g23330 Fragaria vesca
FvH4_7g02880 Fragaria vesca
Glyma.13G198200 Glycine max
Glyma.15G236500 Glycine max
Gohir.A10G183800 Gossypium hirsutum
Gohir.D03G037350 Gossypium hirsutum
Gohir.D04G052700 Gossypium hirsutum
Gohir.D09G152550 Gossypium hirsutum
Gohir.D10G058700 Gossypium hirsutum
Gohir.D10G190800 Gossypium hirsutum
Gorai.011G062800 Gossypium raimondii
Gorai.011G213900 Gossypium raimondii
Gorai.012G058900 Gossypium raimondii
GSVIVG01013527001 Vitis vinifera
HanXRQChr01g0004511 Helianthus annuus
HanXRQChr15g0463071 Helianthus annuus
Haze_03074 Corylus avellana
Haze_26561 Corylus avellana
Hma1.2p1_1396F.1_g280640 Hydrangea macrophylla
Hma1.2p1_1396F.1_g280660 Hydrangea macrophylla
HPP92_025009 Vanilla planifolia
Hund13347 Selenicereus undatus
Lalb_Chr01g0007801 Lupinus albus
Lalb_Chr03g0032781 Lupinus albus
Lalb_Chr19g0132381 Lupinus albus
Lj3g0018542 Lotus japonicus
Lj7A583T43 Lonicera japonica
Lsat_1_v5_gn_1_115021 Lactuca sativa
Manes.04G160100 Manihot esculenta
Manes.11G004700 Manihot esculenta
Mapoly0029s0111 Marchantia polymorpha
MBI02_g23406_MAGBIO Magnolia biondii
MCO04G412 Micromonas commoda
MD02G1288700 Malus domestica
MD07G1038200 Malus domestica
Medtr8g038550 Medicago truncatula
MELO3C005161.2 Cucumis melo
Migut.B01223 Erythranthe guttata
MSTRG.16987 Avicennia marina
Nitab4.5_0000151g0240 Nicotiana tabacum
Nitab4.5_0001669g0120 Nicotiana tabacum
Nn7g36639 Nelumbo nucifera
Os01g0951000 Oryza sativa ssp. japonica
Peaxi162Scf00341g00714 Petunia axillaris
PGR031G1802 Punica granatum
PGSC0003DMG400023151 Solanum tuberosum
Phvul.011G207400 Phaseolus vulgaris
Potri.001G026800 Populus trichocarpa
Potri.003G197900 Populus trichocarpa
Potri.T125206 Populus trichocarpa
Pp3c16_16500 Physcomitrium patens
PRCOL_00004312 Prasinoderma coloniale
Prupe.2G034300 Prunus persica
Psat4g192120 Pisum sativum
PSO063G0746 Papaver somniferum
PSO561G0002 Papaver somniferum
PSO561G0005 Papaver somniferum
PSO782G3285 Papaver somniferum
PSO782G3453 Papaver somniferum
QL04p014603 Quercus lobata
QL04p014965 Quercus lobata
RcHm_v2.0_Chr1g0323831 Rosa chinensis
RcHm_v2.0_Chr3g0482821 Rosa chinensis
RcHm_v2.0_Chr3g0482981 Rosa chinensis
RcHm_v2.0_Chr3g0486211 Rosa chinensis
RcHm_v2.0_Chr4g0404661 Rosa chinensis
RcHm_v2.0_Chr5g0010661 Rosa chinensis
Rhsim07G0066700 Rhododendron simsii
Sabra01G0019600 Salix brachista
Sabra03G0147300 Salix brachista
SalBow5G0382 Salvia bowleyana
SalBow5G3900 Salvia bowleyana
Sc14g0005750 Simmondsia chinensis
Sed0018149 Sechium edule
SEGI_13935 Sequoiadendron giganteum
SEGI_28183 Sequoiadendron giganteum
SEGI_28398 Sequoiadendron giganteum
SEGI_30282 Sequoiadendron giganteum
SEGI_32752 Sequoiadendron giganteum
SEGI_34701 Sequoiadendron giganteum
SEGI_35311 Sequoiadendron giganteum
SGA_v2.0_scaffold124G33625 Striga asiatica
SHI03989 Sapria himalayana
SHI03990 Sapria himalayana
SMO231G0014 Selaginella moellendorffii
SMO351G0530 Selaginella moellendorffii
SMO353G0072 Selaginella moellendorffii
Solyc08g067040.4 Solanum lycopersicum
Sopen08g020990 Solanum pennellii
Sp6g30540 Schrenkiella parvula
TAR369G0157 Trochodendron aralioides
THA.LOC104819128 Tarenaya hassleriana
THA.LOC104826724 Tarenaya hassleriana
Thecc.10G162300 Theobroma cacao
Thhalv10012890m.g Eutrema salsugineum
TPR.G20465 Trifolium pratense
TPR.G24634 Trifolium pratense
TPR.G36904 Trifolium pratense
TPR.G36971 Trifolium pratense
TWI63G0701 Tripterygium wilfordii
unitig_26.g9604 Utricularia gibba
unitig_26.g9605 Utricularia gibba
vmacro13749 Vaccinium macrocarpon
VMungo1127G0085 Vigna mungo
Zm00001eb140970 Zea mays

User provided reference genes

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