Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p15930 Brassica napus
A07p04470 Brassica napus
A09p58490 Brassica napus
Aa31LG8G13880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2311 Anthoceros agrestis
Actinidia00596 Actinidia chinensis
Actinidia20486 Actinidia chinensis
Actinidia23680 Actinidia chinensis
Actinidia27836 Actinidia chinensis
Actinidia31236 Actinidia chinensis
Ah.01g009150 Amaranthus hybridus
Ah.01g022590 Amaranthus hybridus
AL3G49200 Arabidopsis lyrata
AL4G10250 Arabidopsis lyrata
Aqoxy5G01797 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.055XWR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8AQG7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TX33M9 Arachis hypogaea
AT2G16595 Arabidopsis thaliana
AT2G21160 Arabidopsis thaliana
ATR0810G134 Amborella trichopoda
Atru.chr5.3228 Acer truncatum
AUR62010092 Chenopodium quinoa
AUR62013088 Chenopodium quinoa
BcaB03g16378 Brassica carinata
BcaB06g29647 Brassica carinata
BcaB08g34966 Brassica carinata
BcaC06g36160 Brassica carinata
BolC4t26637H Brassica oleracea
BolC7t41129H Brassica oleracea
BolC8t51742H Brassica oleracea
BraA04t17226Z Brassica rapa
BraA07t28239Z Brassica rapa
BraA09t41236Z Brassica rapa
C04p50390 Brassica napus
C07p07100 Brassica napus
C08p41790 Brassica napus
CAN.G104.9 Capsicum annuum
CAN.G588.27 Capsicum annuum
CANSAT25G2163 Cannabis sativa
CARHR106800 Cardamine hirsuta
CARHR112010 Cardamine hirsuta
Carub.0003s3036 Capsella rubella
Carub.0004s0018 Capsella rubella
Ca_15315_v3 Cicer arietinum L.
Ca_19001_v3 Cicer arietinum L.
CBR_g12244 Chara braunii
Cc02_g16510 Coffea canephora
CDE05G0805 Ceratophyllum demersum
CDE05G1728 Ceratophyllum demersum
Cfa005185 Carpinus fangiana
Ciclev10028497m.g Citrus clementina
CiPaw.05G077400 Carya illinoinensis
CiPaw.06G125200 Carya illinoinensis
ClCG00G004480 Citrullus lanatus
ClCG02G011370 Citrullus lanatus
ClCG02G011530 Citrullus lanatus
Cpa.g.sc37.190 Carica papaya
Cre17.g741000 Chlamydomonas reinhardtii
CsaV3_2G015720 Cucumis sativus L.
CsaV3_7G000800 Cucumis sativus L.
CSS0011216 Camellia sinensis var. sinensis
CSS0026989 Camellia sinensis var. sinensis
DCAR_003700 Daucus carota
DCAR_022954 Daucus carota
Dinv04968 Davidia involucrata
Dinv41974 Davidia involucrata
Duzib052G0135 Durio zibethinus
Duzib132G0578 Durio zibethinus
Duzib248G0234 Durio zibethinus
ECA234G2089 Erigeron canadensis
EL10Ac9g21437 Beta vulgaris
Eucgr.I01376 Eucalyptus grandis
FAN15G2172 Fragaria x ananassa
FAN20G2314 Fragaria x ananassa
FAN24G1635 Fragaria x ananassa
FAN27G2842 Fragaria x ananassa
FvH4_2g01990 Fragaria vesca
Glyma.11G098300 Glycine max
Glyma.12G024500 Glycine max
Gohir.A01G164000 Gossypium hirsutum
Gohir.A03G203300 Gossypium hirsutum
Gohir.A04G123000 Gossypium hirsutum
Gohir.A12G039300 Gossypium hirsutum
Gohir.D01G155966 Gossypium hirsutum
Gohir.D02G224600 Gossypium hirsutum
Gohir.D04G165000 Gossypium hirsutum
Gohir.D12G033100 Gossypium hirsutum
Gorai.002G193400 Gossypium raimondii
Gorai.005G252400 Gossypium raimondii
Gorai.008G033900 Gossypium raimondii
Gorai.012G153400 Gossypium raimondii
GSVIVG01024082001 Vitis vinifera
HanXRQChr07g0186881 Helianthus annuus
HanXRQChr15g0478861 Helianthus annuus
HanXRQChr17g0553711 Helianthus annuus
Haze_02196 Corylus avellana
Hma1.2p1_0159F.1_g070470 Hydrangea macrophylla
Hma1.2p1_4000F.1_g338110 Hydrangea macrophylla
HPP92_022638 Vanilla planifolia
HPP92_022647 Vanilla planifolia
Hund00044 Selenicereus undatus
Hund06406 Selenicereus undatus
Lalb_Chr01g0001321 Lupinus albus
Lalb_Chr03g0024701 Lupinus albus
Lalb_Chr19g0139491 Lupinus albus
Lj3g0013984 Lotus japonicus
Lsat_1_v5_gn_4_74620 Lactuca sativa
Lsat_1_v5_gn_5_77821 Lactuca sativa
Lsat_1_v5_gn_8_125920 Lactuca sativa
Manes.04G078100 Manihot esculenta
Manes.11G090100 Manihot esculenta
Mapoly0091s0074 Marchantia polymorpha
MD10G1118300 Malus domestica
MD10G1118400 Malus domestica
Medtr3g117740 Medicago truncatula
Medtr4g075340 Medicago truncatula
MELO3C013377.2 Cucumis melo
MELO3C020784.2 Cucumis melo
Migut.B00168 Erythranthe guttata
Migut.N01281 Erythranthe guttata
MSTRG.20035 Avicennia marina
MSTRG.5427 Avicennia marina
Nitab4.5_0000283g0130 Nicotiana tabacum
Nitab4.5_0000956g0220 Nicotiana tabacum
Nitab4.5_0000980g0230 Nicotiana tabacum
Nitab4.5_0006590g0030 Nicotiana tabacum
Nitab4.5_0013889g0030 Nicotiana tabacum
Nn1g05900 Nelumbo nucifera
Nn2g12964 Nelumbo nucifera
Oeu002953.1 Olea europaea
Oeu008609.2 Olea europaea
Os06g0715500 Oryza sativa ssp. japonica
Peaxi162Scf00362g01035 Petunia axillaris
Peaxi162Scf00538g00519 Petunia axillaris
Peaxi162Scf00684g00024 Petunia axillaris
PGR142G0876 Punica granatum
PGR142G3290 Punica granatum
PGSC0003DMG400001632 Solanum tuberosum
PGSC0003DMG400004442 Solanum tuberosum
Phvul.011G026600 Phaseolus vulgaris
Potri.004G168500 Populus trichocarpa
Potri.009G129800 Populus trichocarpa
Pp3c16_7050 Physcomitrium patens
Pp3c25_540 Physcomitrium patens
Pp3c5_10550 Physcomitrium patens
Prupe.8G160800 Prunus persica
Psat0s11345g0040 Pisum sativum
Psat0s3645g0160 Pisum sativum
Psat0s3881g0040 Pisum sativum
Psat0s3888g0080 Pisum sativum
Psat1g165200 Pisum sativum
Psat3g069520 Pisum sativum
Psat6g101720 Pisum sativum
Psat7g138360 Pisum sativum
Psat7g155680 Pisum sativum
PSO541G5481 Papaver somniferum
PSO675G7811 Papaver somniferum
QL11p047618 Quercus lobata
RcHm_v2.0_Chr6g0245171 Rosa chinensis
Rhsim05G0063100 Rhododendron simsii
Sabra04G0112900 Salix brachista
SalBow3G3144 Salvia bowleyana
SalBow6G6949 Salvia bowleyana
Sc08g0003190 Simmondsia chinensis
Sc08g0003200 Simmondsia chinensis
Sed0009057 Sechium edule
Sed0022407 Sechium edule
Sed0027417 Sechium edule
Sed0028085 Sechium edule
SEGI_10728 Sequoiadendron giganteum
SEGI_19658 Sequoiadendron giganteum
SEGI_34140 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25873 Striga asiatica
Solyc01g111150.2 Solanum lycopersicum
Solyc10g054880.3 Solanum lycopersicum
Sopen01g053210 Solanum pennellii
Sopen10g024810 Solanum pennellii
Sp3g29870 Schrenkiella parvula
Sp4g00310 Schrenkiella parvula
TAR628G1633 Trochodendron aralioides
THA.LOC104804099 Tarenaya hassleriana
THA.LOC104807276 Tarenaya hassleriana
THA.LOC104807786 Tarenaya hassleriana
THA.LOC104824775 Tarenaya hassleriana
Thecc.02G066800 Theobroma cacao
Thhalv10000294m.g Eutrema salsugineum
Thhalv10022826m.g Eutrema salsugineum
TPR.G17190 Trifolium pratense
TPR.G21063 Trifolium pratense
TPR.G27512 Trifolium pratense
TPR.G29380 Trifolium pratense
TPR.G38496 Trifolium pratense
TWI31G1043 Tripterygium wilfordii
TWI79G0488 Tripterygium wilfordii
unitig_37.g12825 Utricularia gibba
vmacro02250 Vaccinium macrocarpon
vmacro17381 Vaccinium macrocarpon
VMungo1127G1529 Vigna mungo
Zm00001eb228050 Zea mays
Zm00001eb272310 Zea mays

User provided reference genes

Program Settings