Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23590 Brassica napus
A02p44540 Brassica napus
A03p48180 Brassica napus
A07p17560 Brassica napus
A09p10020 Brassica napus
A09p44210 Brassica napus
Aa31LG1G14780 Aethionema arabicum
Aa31LG4G19240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1676 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4780 Anthoceros agrestis
Actinidia22991 Actinidia chinensis
Actinidia27581 Actinidia chinensis
Ah.05g168650 Amaranthus hybridus
AL5G31590 Arabidopsis lyrata
AL8G45240 Arabidopsis lyrata
Aqoxy6G02322 Aquilegia oxysepala
AT3G51160 Arabidopsis thaliana
AT5G66280 Arabidopsis thaliana
ATR0147G007 Amborella trichopoda
ATR0989G001 Amborella trichopoda
Atru.chr3.783 Acer truncatum
AUR62023322 Chenopodium quinoa
AUR62038010 Chenopodium quinoa
BcaB01g00545 Brassica carinata
BcaB02g10035 Brassica carinata
BcaB07g29667 Brassica carinata
BcaC03g18415 Brassica carinata
BcaC03g18421 Brassica carinata
BcaC04g23122 Brassica carinata
BcaC06g33050 Brassica carinata
BcaC06g34695 Brassica carinata
BcaC09g50085 Brassica carinata
BcaNung00396 Brassica carinata
BcaNung04510 Brassica carinata
BolC1t02854H Brassica oleracea
BolC2t12552H Brassica oleracea
BolC7t43072H Brassica oleracea
BolC7t45137H Brassica oleracea
BolC8t50260H Brassica oleracea
BraA01t02266Z Brassica rapa
BraA02t09370Z Brassica rapa
BraA03t13926Z Brassica rapa
BraA07t29476Z Brassica rapa
BraA09t39882Z Brassica rapa
C01p29280 Brassica napus
C02p64940 Brassica napus
C07p25520 Brassica napus
C07p46210 Brassica napus
C08p26430 Brassica napus
C09p11880 Brassica napus
CAN.G395.30 Capsicum annuum
CAN.G843.17 Capsicum annuum
CAN.G857.17 Capsicum annuum
CAN.G900.55 Capsicum annuum
CANSAT78G2109 Cannabis sativa
CARHR160760 Cardamine hirsuta
CARHR281430 Cardamine hirsuta
Carub.0005s1756 Capsella rubella
Carub.0008s2821 Capsella rubella
Ca_24909_v3 Cicer arietinum L.
CBR_g50778 Chara braunii
CBR_g54109 Chara braunii
Cc07_g10580 Coffea canephora
CDE02G3936 Ceratophyllum demersum
CDE04G2821 Ceratophyllum demersum
CDE05G2114 Ceratophyllum demersum
CDE05G3324 Ceratophyllum demersum
CDE06G0344 Ceratophyllum demersum
Cfa006958 Carpinus fangiana
Ciclev10025903m.g Citrus clementina
CiPaw.08G133300 Carya illinoinensis
ClCG07G008430 Citrullus lanatus
COL.COLO4_21932 Corchorus olitorius
Cpa.g.sc6.230 Carica papaya
CsaV3_4G005740 Cucumis sativus L.
CSS0016130 Camellia sinensis var. sinensis
CSS0047804 Camellia sinensis var. sinensis
DCAR_017348 Daucus carota
Dinv33616 Davidia involucrata
Dinv37745 Davidia involucrata
Dinv40072 Davidia involucrata
Duzib147G0565 Durio zibethinus
Duzib187G0451 Durio zibethinus
Duzib264G0302 Durio zibethinus
ECA232G0085 Erigeron canadensis
ECA232G2169 Erigeron canadensis
EL10Ac1g00676 Beta vulgaris
Eucgr.J02407 Eucalyptus grandis
FAN09G4009 Fragaria x ananassa
FAN19G0129 Fragaria x ananassa
FAN23G1403 Fragaria x ananassa
FAN26G0117 Fragaria x ananassa
FAN28G2312 Fragaria x ananassa
FvH4_1g12010 Fragaria vesca
FvH4_1g15471 Fragaria vesca
FvH4_2g13942 Fragaria vesca
Glyma.01G167500 Glycine max
Glyma.11G075700 Glycine max
Gohir.A10G097800 Gossypium hirsutum
Gohir.A11G176600 Gossypium hirsutum
Gohir.A12G060200 Gossypium hirsutum
Gohir.D11G184400 Gossypium hirsutum
Gorai.007G196100 Gossypium raimondii
GSVIVG01018803001 Vitis vinifera
HanXRQChr11g0325961 Helianthus annuus
Haze_03793 Corylus avellana
Haze_27271 Corylus avellana
Hma1.2p1_0266F.1_g106820 Hydrangea macrophylla
Hma1.2p1_2281F.1_g318760 Hydrangea macrophylla
HPP92_002104 Vanilla planifolia
Hund17160 Selenicereus undatus
Hund26926 Selenicereus undatus
Lalb_Chr05g0212431 Lupinus albus
Lalb_Chr16g0377551 Lupinus albus
Lj2A466T49 Lonicera japonica
Lj2A474T35 Lonicera japonica
Lj2g0022271 Lotus japonicus
Lj6g0006311 Lotus japonicus
Lsat_1_v5_gn_4_149120 Lactuca sativa
Lsat_1_v5_gn_4_152740 Lactuca sativa
Lsat_1_v5_gn_4_152760 Lactuca sativa
Manes.01G144700 Manihot esculenta
Manes.02G102800 Manihot esculenta
Mapoly0040s0032 Marchantia polymorpha
Mapoly0053s0025 Marchantia polymorpha
Mapoly0096s0039 Marchantia polymorpha
Mapoly0096s0040 Marchantia polymorpha
MBI09_g43736_MAGBIO Magnolia biondii
MCO12G318 Micromonas commoda
MD02G1134100 Malus domestica
MD15G1247100 Malus domestica
Medtr5g021760 Medicago truncatula
Medtr5g021770 Medicago truncatula
MELO3C032603.2 Cucumis melo
Migut.H01145 Erythranthe guttata
MSTRG.23415 Avicennia marina
Nitab4.5_0004254g0040 Nicotiana tabacum
Nitab4.5_0005721g0010 Nicotiana tabacum
Nitab4.5_0006764g0050 Nicotiana tabacum
Nitab4.5_0009266g0050 Nicotiana tabacum
Nn1g09238 Nelumbo nucifera
Nn5g29270 Nelumbo nucifera
Nn6g32295 Nelumbo nucifera
Oeu048453.1 Olea europaea
Oeu063338.1 Olea europaea
Os06g0137700 Oryza sativa ssp. japonica
Peaxi162Scf00083g00083 Petunia axillaris
Peaxi162Scf00200g00038 Petunia axillaris
Peaxi162Scf00200g00039 Petunia axillaris
Peaxi162Scf00256g00031 Petunia axillaris
PGR119G0157 Punica granatum
PGR142G3173 Punica granatum
PGSC0003DMG400003633 Solanum tuberosum
PGSC0003DMG400014178 Solanum tuberosum
Phvul.002G110300 Phaseolus vulgaris
Potri.005G116200 Populus trichocarpa
Potri.007G013900 Populus trichocarpa
Pp3c14_6460 Physcomitrium patens
Pp3c17_11890 Physcomitrium patens
Pp3c17_5360 Physcomitrium patens
Pp3c5_15180 Physcomitrium patens
Pp3c6_12710 Physcomitrium patens
Prupe.7G166700 Prunus persica
Psat2g155320 Pisum sativum
PSO541G5137 Papaver somniferum
PSO675G4838 Papaver somniferum
QL06p033636 Quercus lobata
QL10p013176 Quercus lobata
RcHm_v2.0_Chr2g0099631 Rosa chinensis
Rhsim08G0034400 Rhododendron simsii
Sabra05G0095200 Salix brachista
Sabra07G0011300 Salix brachista
Sc02g0003370 Simmondsia chinensis
Sc23g0004000 Simmondsia chinensis
Sed0007406 Sechium edule
SEGI_09344 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35099 Striga asiatica
SGA_v2.0_scaffold142G35671 Striga asiatica
SGA_v2.0_scaffold233G43581 Striga asiatica
SHI08572 Sapria himalayana
SMO146G0088 Selaginella moellendorffii
Solyc02g084210.1 Solanum lycopersicum
Solyc03g118270.1 Solanum lycopersicum
Sopen02g028950 Solanum pennellii
Sopen03g037180 Solanum pennellii
Sp2g30320 Schrenkiella parvula
Sp5g11050 Schrenkiella parvula
TAR381G0223 Trochodendron aralioides
TAR625G1227 Trochodendron aralioides
TAR628G1446 Trochodendron aralioides
THA.LOC104821321 Tarenaya hassleriana
THA.LOC104826596 Tarenaya hassleriana
Thecc.01G021100 Theobroma cacao
Thhalv10010458m.g Eutrema salsugineum
TPR.G2410 Trifolium pratense
TWI09G0379 Tripterygium wilfordii
TWI73G0147 Tripterygium wilfordii
unitig_21.g20543 Utricularia gibba
unitig_749.g13597 Utricularia gibba
vmacro18421 Vaccinium macrocarpon
VMungo1215G0198 Vigna mungo
Zm00001eb270090 Zea mays
Zm00001eb377770 Zea mays

User provided reference genes

Program Settings