Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40810 Brassica napus
A03p33670 Brassica napus
A07p01960 Brassica napus
Aa31LG5G15020 Aethionema arabicum
Aa31LG5G20570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5148 Anthoceros agrestis
Actinidia29400 Actinidia chinensis
Ah.15g091810 Amaranthus hybridus
AL3G14620 Arabidopsis lyrata
Aqoxy7G02117 Aquilegia oxysepala
Aqoxy7G03650 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GB3JX0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L2SHRD Arachis hypogaea
AT3G04600 Arabidopsis thaliana
ATR0743G002 Amborella trichopoda
Atru.chr5.3183 Acer truncatum
Atru.chr7.238 Acer truncatum
AUR62005286 Chenopodium quinoa
AUR62009179 Chenopodium quinoa
BcaB01g02343 Brassica carinata
BcaB03g16657 Brassica carinata
BcaB04g19317 Brassica carinata
BcaB04g21362 Brassica carinata
BcaB04g21381 Brassica carinata
BcaB06g25549 Brassica carinata
BcaC01g04365 Brassica carinata
BcaC01g04366 Brassica carinata
BcaC06g36447 Brassica carinata
BcaC09g47791 Brassica carinata
BcaC09g47814 Brassica carinata
BcaC09g48536 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00900 Brassica napus
BolC1t05722H Brassica oleracea
BolC1t05738H Brassica oleracea
BolC3t16357H Brassica oleracea
BolC3t16362H Brassica oleracea
BolC3t16365H Brassica oleracea
BolC3t16371H Brassica oleracea
BolC3t16373H Brassica oleracea
BolC3t16384H Brassica oleracea
BolC3t16391H Brassica oleracea
BolC7t40804H Brassica oleracea
BraA01t04517Z Brassica rapa
BraA03t12541Z Brassica rapa
BraA07t27995Z Brassica rapa
C01p39540 Brassica napus
C03p40860 Brassica napus
C03p40970 Brassica napus
C07p04090 Brassica napus
CAN.G195.16 Capsicum annuum
CANSAT54G0453 Cannabis sativa
CARHR060040 Cardamine hirsuta
CARHR078780 Cardamine hirsuta
CARHR078790 Cardamine hirsuta
Carub.0003s0375 Capsella rubella
Ca_14800_v3 Cicer arietinum L.
CBR_g37637 Chara braunii
Cc02_g30090 Coffea canephora
CDE08G0778 Ceratophyllum demersum
Cfa013451 Carpinus fangiana
Ciclev10008518m.g Citrus clementina
CiPaw.07G196900 Carya illinoinensis
ClCG09G011880 Citrullus lanatus
COL.COLO4_25317 Corchorus olitorius
Cpa.g.sc1142.2 Carica papaya
Cre12.g522350 Chlamydomonas reinhardtii
CsaV3_5G014470 Cucumis sativus L.
CsaV3_5G014480 Cucumis sativus L.
CSS0022391 Camellia sinensis var. sinensis
CSS0036286 Camellia sinensis var. sinensis
DCAR_018748 Daucus carota
Dinv04743 Davidia involucrata
Dinv11744 Davidia involucrata
Dinv27617 Davidia involucrata
Duzib168G1687 Durio zibethinus
Duzib170G0367 Durio zibethinus
ECA233G4312 Erigeron canadensis
ECA238G1984 Erigeron canadensis
EL10Ac4g09810 Beta vulgaris
Eucgr.B01376 Eucalyptus grandis
Eucgr.B01628 Eucalyptus grandis
FAN01G1786 Fragaria x ananassa
FAN04G0408 Fragaria x ananassa
FAN07G2734 Fragaria x ananassa
FAN08G2131 Fragaria x ananassa
FAN09G0153 Fragaria x ananassa
FAN12G4063 Fragaria x ananassa
FAN13G3113 Fragaria x ananassa
FAN16G0573 Fragaria x ananassa
FAN17G0794 Fragaria x ananassa
FAN18G4190 Fragaria x ananassa
FAN22G0185 Fragaria x ananassa
FvH4_4g11950 Fragaria vesca
FvH4_5g27321 Fragaria vesca
Glyma.03G108900 Glycine max
Glyma.13G008200 Glycine max
Gohir.A09G104500 Gossypium hirsutum
Gohir.D09G101200 Gossypium hirsutum
Gorai.006G118600 Gossypium raimondii
GSVIVG01020576001 Vitis vinifera
HanXRQChr11g0333651 Helianthus annuus
HanXRQChr17g0559071 Helianthus annuus
Haze_07729 Corylus avellana
Haze_26816 Corylus avellana
Hma1.2p1_0123F.1_g058080 Hydrangea macrophylla
Hma1.2p1_1064F.1_g253620 Hydrangea macrophylla
HPP92_011708 Vanilla planifolia
Hund21749 Selenicereus undatus
Hund21807 Selenicereus undatus
Hund21808 Selenicereus undatus
Lalb_Chr21g0312861 Lupinus albus
Lj3g0011249 Lotus japonicus
Lj4g0019738 Lotus japonicus
Lj6g0015763 Lotus japonicus
Lj7A725T58 Lonicera japonica
Lsat_1_v5_gn_2_16301 Lactuca sativa
Manes.12G077800 Manihot esculenta
Mapoly0053s0020 Marchantia polymorpha
MBI07_g42069_MAGBIO Magnolia biondii
MCO14G308 Micromonas commoda
MD04G1236500 Malus domestica
MD12G1255800 Malus domestica
Medtr8g007305 Medicago truncatula
MELO3C016671.2 Cucumis melo
Migut.E01397 Erythranthe guttata
MSTRG.11832 Avicennia marina
Nitab4.5_0000288g0150 Nicotiana tabacum
Nitab4.5_0003036g0010 Nicotiana tabacum
Nitab4.5_0006136g0020 Nicotiana tabacum
Nitab4.5_0009273g0020 Nicotiana tabacum
Nitab4.5_0009273g0030 Nicotiana tabacum
Nn1g02302 Nelumbo nucifera
Oeu028094.1 Olea europaea
Oeu028097.1 Olea europaea
Oeu028126.2 Olea europaea
Oeu028438.1 Olea europaea
Oeu044972.2 Olea europaea
Oeu063204.2 Olea europaea
Os07g0278400 Oryza sativa ssp. japonica
Os12g0540900 Oryza sativa ssp. japonica
Peaxi162Scf00020g00242 Petunia axillaris
Peaxi162Scf00047g02422 Petunia axillaris
Peaxi162Scf00145g00156 Petunia axillaris
Peaxi162Scf00213g01416 Petunia axillaris
PGR119G1638 Punica granatum
PGSC0003DMG400029565 Solanum tuberosum
Phvul.010G046300 Phaseolus vulgaris
Potri.009G159300 Populus trichocarpa
Pp3c2_27540 Physcomitrium patens
PRCOL_00004976 Prasinoderma coloniale
Prupe.6G356500 Prunus persica
Prupe.7G057000 Prunus persica
Prupe.7G057800 Prunus persica
Psat2g164840 Pisum sativum
Psat4g222840 Pisum sativum
PSO063G6945 Papaver somniferum
PSO170G1996 Papaver somniferum
QL01p002104 Quercus lobata
QL01p002114 Quercus lobata
QL06p038393 Quercus lobata
QL12p030357 Quercus lobata
RcHm_v2.0_Chr3g0493481 Rosa chinensis
RcHm_v2.0_Chr7g0219201 Rosa chinensis
RcHm_v2.0_Chr7g0219221 Rosa chinensis
RcHm_v2.0_Chr7g0223011 Rosa chinensis
Rhsim12G0003500 Rhododendron simsii
Sabra04G0133700 Salix brachista
Sabra09G0124600 Salix brachista
SalBow7G4245 Salvia bowleyana
SalBow8G4285 Salvia bowleyana
Sc06g0005180 Simmondsia chinensis
Sc06g0005190 Simmondsia chinensis
Sed0014785 Sechium edule
Sed0022912 Sechium edule
Sed0023632 Sechium edule
SEGI_09752 Sequoiadendron giganteum
SEGI_19003 Sequoiadendron giganteum
SEGI_21996 Sequoiadendron giganteum
SGA_v2.0_scaffold269G46296 Striga asiatica
SGA_v2.0_scaffold269G46297 Striga asiatica
SGA_v2.0_scaffold447G51751 Striga asiatica
SHI16564 Sapria himalayana
SMO115G0240 Selaginella moellendorffii
SMO143G0103 Selaginella moellendorffii
SMO352G0088 Selaginella moellendorffii
Solyc08g074410.4 Solanum lycopersicum
Sopen08g023060 Solanum pennellii
Sp3g03440 Schrenkiella parvula
Sp6g11650 Schrenkiella parvula
TAR365G0738 Trochodendron aralioides
TAR636G1778 Trochodendron aralioides
THA.LOC104802839 Tarenaya hassleriana
THA.LOC104821663 Tarenaya hassleriana
Thecc.09G264900 Theobroma cacao
Thhalv10003092m.g Eutrema salsugineum
Thhalv10004344m.g Eutrema salsugineum
Thhalv10020864m.g Eutrema salsugineum
TPR.G21208 Trifolium pratense
TPR.G5320 Trifolium pratense
TWI15G0949 Tripterygium wilfordii
TWI34G0756 Tripterygium wilfordii
unitig_32.g11639 Utricularia gibba
vmacro00932 Vaccinium macrocarpon
VMungo0331G0230 Vigna mungo
Zm00001eb054210 Zea mays

User provided reference genes

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