Gene: PGSC0003DMG400029565

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400029565
  • Transcript Identifier PGSC0003DMT400076029
  • Gene Type Coding gene
  • Location ST4.03ch08 : 45264338-45269111 : positive

Gene Family Information

  • ID HOM05D003334
  • #Genes/#Species 205/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37469112
  • id PGSC0003DMG400029565.v4.03
  • uniprot M1CW30

Descriptions

  • Description TRNA synthetase class I family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006436
IBA
IEA
GOA Databasetryptophanyl-tRNA aminoacylation
GO:0006436
IEA
InterProtryptophanyl-tRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004830
IBA
IEA
GOA Databasetryptophan-tRNA ligase activity
GO:0004830
IEA
InterProtryptophan-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G04600
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002305 Aminoacyl-tRNA synthetase, class Ic
IPR002306 Tryptophan-tRNA ligase
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Mapman id Description
17.2.20 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase