Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p33220 Brassica napus
A07p00650 Brassica napus
Aa31LG8G16930 Aethionema arabicum
Aa31LG8G3460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2748 Anthoceros agrestis
Actinidia05765 Actinidia chinensis
Actinidia30928 Actinidia chinensis
Ah.02g114730 Amaranthus hybridus
AL1G39022 Arabidopsis lyrata
AL3G29070 Arabidopsis lyrata
AL3G48120 Arabidopsis lyrata
Aqoxy7G03886 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JNCQ1V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M26Z43 Arachis hypogaea
AT2G20000 Arabidopsis thaliana
AT3G16320 Arabidopsis thaliana
ATR0605G018 Amborella trichopoda
Atru.chr7.1441_Atru.chr7.1442 Acer truncatum
AUR62029540 Chenopodium quinoa
AUR62034804 Chenopodium quinoa
BcaB03g16786 Brassica carinata
BcaB06g25725 Brassica carinata
BcaC05g28893 Brassica carinata
BcaC06g36672 Brassica carinata
BolC5t33768H Brassica oleracea
BolC7t40564H Brassica oleracea
BraA05t22145Z Brassica rapa
BraA07t27863Z Brassica rapa
C04p54040 Brassica napus
C05p50180 Brassica napus
C07p01500 Brassica napus
CAN.G165.27 Capsicum annuum
CAN.G303.59 Capsicum annuum
CANSAT56G0288 Cannabis sativa
CARHR091530 Cardamine hirsuta
CARHR110420 Cardamine hirsuta
CARHR288860 Cardamine hirsuta
Carub.0003s1607 Capsella rubella
Carub.0003s3424 Capsella rubella
Ca_06722_v3 Cicer arietinum L.
Ca_06723_v3 Cicer arietinum L.
Ca_20732_v3 Cicer arietinum L.
CBR_g102 Chara braunii
Cc02_g31350 Coffea canephora
CDE05G0381 Ceratophyllum demersum
CDE05G0395 Ceratophyllum demersum
CDE05G0835 Ceratophyllum demersum
Cfa001183 Carpinus fangiana
Cfa003198 Carpinus fangiana
Cfa011406 Carpinus fangiana
Cfa022856 Carpinus fangiana
Ciclev10007544m.g Citrus clementina
CiPaw.01G151200 Carya illinoinensis
CiPaw.02G084900 Carya illinoinensis
ClCG06G009040 Citrullus lanatus
COL.COLO4_30491 Corchorus olitorius
COL.COLO4_30492 Corchorus olitorius
COL.COLO4_34768 Corchorus olitorius
Cpa.g.sc109.13 Carica papaya
Cpa.g.sc109.17 Carica papaya
Cpa.g.sc109.20 Carica papaya
Cpa.g.sc40.52 Carica papaya
Cre17.g740510 Chlamydomonas reinhardtii
CsaV3_1G045710 Cucumis sativus L.
CSS0004573 Camellia sinensis var. sinensis
DCAR_003903 Daucus carota
DCAR_007883 Daucus carota
Dinv11538 Davidia involucrata
Dinv17765 Davidia involucrata
Duzib150G0839 Durio zibethinus
Duzib168G1984 Durio zibethinus
Duzib187G0026 Durio zibethinus
ECA236G0920 Erigeron canadensis
EL10Ac5g11341 Beta vulgaris
EL10Ac8g18344 Beta vulgaris
Eucgr.C01007 Eucalyptus grandis
Eucgr.D00685 Eucalyptus grandis
FAN19G3015 Fragaria x ananassa
FAN23G1082 Fragaria x ananassa
FAN26G0830 Fragaria x ananassa
FAN26G2473 Fragaria x ananassa
FAN28G0298 Fragaria x ananassa
FvH4_1g05910 Fragaria vesca
Glyma.08G046900 Glycine max
Glyma.13G049400 Glycine max
Glyma.18G279500 Glycine max
Glyma.19G042200 Glycine max
Gohir.A02G118200 Gossypium hirsutum
Gohir.A05G025700 Gossypium hirsutum
Gohir.A13G196000 Gossypium hirsutum
Gohir.D03G058800 Gossypium hirsutum
Gohir.D05G027200 Gossypium hirsutum
Gohir.D13G201100 Gossypium hirsutum
Gorai.003G062700 Gossypium raimondii
Gorai.009G027300 Gossypium raimondii
Gorai.013G229900 Gossypium raimondii
GSVIVG01015317001 Vitis vinifera
HanXRQChr04g0114411 Helianthus annuus
HanXRQChr15g0482131 Helianthus annuus
HanXRQChr15g0482141 Helianthus annuus
Haze_23981 Corylus avellana
Haze_25809 Corylus avellana
Hma1.2p1_1047F.1_g251620 Hydrangea macrophylla
HPP92_022013 Vanilla planifolia
HPP92_022014 Vanilla planifolia
HPP92_022019 Vanilla planifolia
Hund02477 Selenicereus undatus
Hund10083 Selenicereus undatus
Lalb_Chr02g0158441 Lupinus albus
Lalb_Chr06g0174721 Lupinus albus
Lalb_Chr06g0174731 Lupinus albus
Lalb_Chr06g0174741 Lupinus albus
Lj1C1172G8 Lonicera japonica
Lj1g0006963 Lotus japonicus
Lj2g0018429 Lotus japonicus
Lsat_1_v5_gn_5_189561 Lactuca sativa
Lsat_1_v5_gn_5_43220 Lactuca sativa
Lsat_1_v5_gn_7_28060 Lactuca sativa
Manes.03G025500 Manihot esculenta
Manes.16G110400 Manihot esculenta
Mapoly0024s0107 Marchantia polymorpha
MCO09G600 Micromonas commoda
MD02G1061000 Malus domestica
MD15G1194500 Malus domestica
Medtr6g016680 Medicago truncatula
Medtr6g016715 Medicago truncatula
Medtr6g016745 Medicago truncatula
Medtr6g033355 Medicago truncatula
Medtr7g019230 Medicago truncatula
MELO3C024685.2 Cucumis melo
Migut.I00703 Erythranthe guttata
MSTRG.22791 Avicennia marina
Nitab4.5_0003462g0010 Nicotiana tabacum
Nitab4.5_0005427g0040 Nicotiana tabacum
Nn6g35303 Nelumbo nucifera
Nn8g39106 Nelumbo nucifera
Oeu041533.1 Olea europaea
Oeu053267.2 Olea europaea
Os06g0622500 Oryza sativa ssp. japonica
Peaxi162Scf00090g02113 Petunia axillaris
Peaxi162Scf01003g00120 Petunia axillaris
PGR142G1632 Punica granatum
PGSC0003DMG400002563 Solanum tuberosum
PGSC0003DMG400033320 Solanum tuberosum
Phvul.001G130400 Phaseolus vulgaris
Phvul.004G048400 Phaseolus vulgaris
Phvul.008G021500 Phaseolus vulgaris
Potri.006G164000 Populus trichocarpa
Potri.017G065600 Populus trichocarpa
Potri.018G086300 Populus trichocarpa
Pp3c11_22970 Physcomitrium patens
Pp3c7_3760 Physcomitrium patens
PRCOL_00001480 Prasinoderma coloniale
Prupe.7G222000 Prunus persica
Psat1g063480 Pisum sativum
Psat3g146520 Pisum sativum
PSO210G4003 Papaver somniferum
PSO210G4840 Papaver somniferum
QL09p023443 Quercus lobata
RcHm_v2.0_Chr2g0091551 Rosa chinensis
RcHm_v2.0_Chr2g0091631 Rosa chinensis
Rhsim10G0109100 Rhododendron simsii
Rhsim10G0110900 Rhododendron simsii
Sabra18G0074600 Salix brachista
SalBow1G8065 Salvia bowleyana
Sc25g0000530 Simmondsia chinensis
Sc25g0000540 Simmondsia chinensis
Sed0012844 Sechium edule
Sed0014147 Sechium edule
SEGI_02735 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14722 Striga asiatica
SGA_v2.0_scaffold5G02773 Striga asiatica
SHI02699 Sapria himalayana
SHI02700 Sapria himalayana
SHI02701 Sapria himalayana
SHI02702 Sapria himalayana
SHI02703 Sapria himalayana
SHI02705 Sapria himalayana
SMO118G0311 Selaginella moellendorffii
Solyc03g061590.4 Solanum lycopersicum
Solyc03g061600.4 Solanum lycopersicum
Sopen03g014540 Solanum pennellii
Sp3g14690 Schrenkiella parvula
Sp3g33320 Schrenkiella parvula
TAR383G0497 Trochodendron aralioides
TAR626G1939 Trochodendron aralioides
THA.LOC104804009 Tarenaya hassleriana
THA.LOC104810537 Tarenaya hassleriana
THA.LOC104814565 Tarenaya hassleriana
Thecc.06G098300 Theobroma cacao
Thecc.09G102400 Theobroma cacao
Thhalv10000477m.g Eutrema salsugineum
Thhalv10000671m.g Eutrema salsugineum
Thhalv10001914m.g Eutrema salsugineum
Thhalv10021943m.g Eutrema salsugineum
Thhalv10027380m.g Eutrema salsugineum
TPR.G3256 Trifolium pratense
TPR.G9679 Trifolium pratense
TWI32G1357 Tripterygium wilfordii
unitig_62.g23581 Utricularia gibba
unitig_62.g23582 Utricularia gibba
unitig_63.g29476 Utricularia gibba
unitig_63.g29477 Utricularia gibba
vmacro05243 Vaccinium macrocarpon
VMungo0464G1563 Vigna mungo
VMungo1383G1642 Vigna mungo
Zm00001eb144740 Zea mays

User provided reference genes

Program Settings