Gene: COL.COLO4_34768

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_34768
  • Transcript Identifier COL.rna33458
  • Gene Type Coding gene
  • Location AWUE01022440.1 : 21648-27706 : negative

Gene Family Information

  • ID HOM05D003301
  • #Genes/#Species 207/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna33458
  • GenBank OMO58235.1
  • id gene34740
  • gene_name COLO4_34768
  • uniprot A0A1R3GJG3

Descriptions

  • Description Tetratricopeptide TPR-1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048829
ISO
PLAZA Integrative Orthologyroot cap development AT2G20000
GO:0010071
ISO
PLAZA Integrative Orthologyroot meristem specification AT2G20000
GO:0007276
ISO
PLAZA Integrative Orthologygamete generation AT2G20000
GO:0007346
ISO
PLAZA Integrative Orthologyregulation of mitotic cell cycle AT2G20000
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT2G20000
GO:0051510
ISO
PLAZA Integrative Orthologyregulation of unidimensional cell growth AT2G20000
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT2G20000
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT2G20000
GO:0030154
ISO
PLAZA Integrative Orthologycell differentiation AT2G20000

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005680
ISO
PLAZA Integrative Orthologyanaphase-promoting complex AT2G20000
GO:0009504
ISO
PLAZA Integrative Orthologycell plate AT2G20000
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G20000
GO:0005819
ISO
PLAZA Integrative Orthologyspindle AT2G20000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR019734 Tetratricopeptide repeat
IPR001440 Tetratricopeptide repeat 1
Mapman id Description
13.3.3.1.1.2.1 Cell cycle organisation.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin protein ligase complex.arc lamp subcomplex.component APC3