Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07880 Brassica napus
A03p59700 Brassica napus
A05p12210 Brassica napus
A06p20490 Brassica napus
A08p19320 Brassica napus
Aa31LG8G15930 Aethionema arabicum
Actinidia04152 Actinidia chinensis
Actinidia35994 Actinidia chinensis
Ah.08g212150 Amaranthus hybridus
AL3G53110 Arabidopsis lyrata
AL7G21890 Arabidopsis lyrata
Aqoxy1G01965 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6TSM6Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LWG93W Arachis hypogaea
AT2G18840 Arabidopsis thaliana
AT4G30260 Arabidopsis thaliana
ATR0580G426 Amborella trichopoda
Atru.chr7.659 Acer truncatum
AUR62034052 Chenopodium quinoa
AUR62040631 Chenopodium quinoa
BcaB03g12640 Brassica carinata
BcaC01g01161 Brassica carinata
BcaC02g09549 Brassica carinata
BcaC04g20174 Brassica carinata
BcaC05g28230 Brassica carinata
BcaC06g35725 Brassica carinata
BcaC09g51810 Brassica carinata
BcaNung00534 Brassica carinata
BcaNung03003 Brassica carinata
BcaNung03004 Brassica carinata
BolC1t00869H Brassica oleracea
BolC2t08955H Brassica oleracea
BolC2t10758H Brassica oleracea
BolC3t21189H Brassica oleracea
BolC4t25984H Brassica oleracea
BolC5t33018H Brassica oleracea
BolC7t41634H Brassica oleracea
BolC7t46233H Brassica oleracea
BolC9t56073H Brassica oleracea
BraA01t00734Z Brassica rapa
BraA03t15022Z Brassica rapa
BraA06t25129Z Brassica rapa
BraA08t33893Z Brassica rapa
C01p08790 Brassica napus
C01p16400 Brassica napus
C02p47120 Brassica napus
C03p88780 Brassica napus
C05p42900 Brassica napus
C07p57720 Brassica napus
C07p57740 Brassica napus
C09p32250 Brassica napus
CAN.G32.5 Capsicum annuum
CAN.G5.10 Capsicum annuum
CANSAT11G2281 Cannabis sativa
CARHR109400 Cardamine hirsuta
CARHR238170 Cardamine hirsuta
Carub.0003s3307 Capsella rubella
Carub.0007s1035 Capsella rubella
Ca_21218_v3 Cicer arietinum L.
CBR_g23822 Chara braunii
Cc06_g13310 Coffea canephora
CDE02G4007 Ceratophyllum demersum
Cfa013513 Carpinus fangiana
Ciclev10009141m.g Citrus clementina
CiPaw.07G191800 Carya illinoinensis
CiPaw.08G036800 Carya illinoinensis
ClCG01G005520 Citrullus lanatus
Cpa.g.sc95.57 Carica papaya
Cre07.g326400 Chlamydomonas reinhardtii
CsaV3_5G005750 Cucumis sativus L.
CSS0017554 Camellia sinensis var. sinensis
CSS0020996 Camellia sinensis var. sinensis
Dinv23253 Davidia involucrata
Dinv41253 Davidia involucrata
Dinv42729 Davidia involucrata
Dinv43372 Davidia involucrata
Duzib160G0168 Durio zibethinus
Duzib192G0054 Durio zibethinus
Duzib235G0677 Durio zibethinus
ECA236G4509 Erigeron canadensis
ECA240G1971 Erigeron canadensis
EL10Ac8g19425 Beta vulgaris
Eucgr.C02287 Eucalyptus grandis
FAN07G1981 Fragaria x ananassa
FAN12G1523 Fragaria x ananassa
FAN12G3343 Fragaria x ananassa
FAN17G0462 Fragaria x ananassa
FAN22G0867 Fragaria x ananassa
FvH4_4g09840 Fragaria vesca
Glyma.13G096100 Glycine max
Glyma.17G064000 Glycine max
Gohir.A02G090301 Gossypium hirsutum
Gohir.A05G113700 Gossypium hirsutum
Gohir.A10G003200 Gossypium hirsutum
Gohir.D02G107400 Gossypium hirsutum
Gohir.D05G114100 Gossypium hirsutum
Gohir.D10G003200 Gossypium hirsutum
Gorai.005G122000 Gossypium raimondii
Gorai.009G118100 Gossypium raimondii
Gorai.011G003600 Gossypium raimondii
GSVIVG01016111001 Vitis vinifera
GSVIVG01029199001 Vitis vinifera
HanXRQChr09g0245001 Helianthus annuus
HanXRQChr09g0254481 Helianthus annuus
HanXRQChr12g0365401 Helianthus annuus
Haze_22109 Corylus avellana
Hma1.2p1_1710F.1_g298640 Hydrangea macrophylla
Hma1.2p1_2478F.1_g322920 Hydrangea macrophylla
HPP92_001091 Vanilla planifolia
HPP92_003207 Vanilla planifolia
Hund22399 Selenicereus undatus
Lalb_Chr07g0180421 Lupinus albus
Lalb_Chr12g0199351 Lupinus albus
Lj4g0022126 Lotus japonicus
Lj7A472T61 Lonicera japonica
Lj9C686G6 Lonicera japonica
Lsat_1_v5_gn_7_54500 Lactuca sativa
Lsat_1_v5_gn_8_67041 Lactuca sativa
Manes.06G024000 Manihot esculenta
Manes.14G150500 Manihot esculenta
Mapoly0113s0010 Marchantia polymorpha
MBI14_g17360_MAGBIO Magnolia biondii
MCO01G262 Micromonas commoda
MD13G1256000 Malus domestica
MD13G1256300 Malus domestica
Medtr4g128290 Medicago truncatula
MELO3C005378.2 Cucumis melo
Migut.J01473 Erythranthe guttata
Migut.K00245 Erythranthe guttata
MSTRG.19702 Avicennia marina
MSTRG.26224 Avicennia marina
MSTRG.6209 Avicennia marina
Nitab4.5_0004307g0020 Nicotiana tabacum
Nitab4.5_0006624g0010 Nicotiana tabacum
Nitab4.5_0006624g0030 Nicotiana tabacum
Nitab4.5_0007820g0010 Nicotiana tabacum
Nitab4.5_0007820g0020 Nicotiana tabacum
Nitab4.5_0024961g0010 Nicotiana tabacum
Nitab4.5_0024961g0020 Nicotiana tabacum
Nitab4.5_0025199g0010 Nicotiana tabacum
Nitab4.5_0026144g0010 Nicotiana tabacum
Nn2g12708 Nelumbo nucifera
Oeu042156.1 Olea europaea
Oeu049685.1 Olea europaea
Os01g0867700 Oryza sativa ssp. japonica
Os05g0437500 Oryza sativa ssp. japonica
Peaxi162Scf00231g00812 Petunia axillaris
PGR102G0922 Punica granatum
PGSC0003DMG400002422 Solanum tuberosum
PGSC0003DMG401002421 Solanum tuberosum
Phvul.003G146500 Phaseolus vulgaris
Potri.006G169200 Populus trichocarpa
Potri.018G093800 Populus trichocarpa
Pp3c11_7990 Physcomitrium patens
Pp3c24_16520 Physcomitrium patens
Pp3c7_23160 Physcomitrium patens
Pp3c7_23220 Physcomitrium patens
PRCOL_00000817 Prasinoderma coloniale
Prupe.1G086600 Prunus persica
Psat4g011760 Pisum sativum
PSO541G0246 Papaver somniferum
PSO675G6578 Papaver somniferum
QL02p097606 Quercus lobata
RcHm_v2.0_Chr1g0326901 Rosa chinensis
RcHm_v2.0_Chr2g0110911 Rosa chinensis
RcHm_v2.0_Chr2g0167531 Rosa chinensis
RcHm_v2.0_Chr4g0402611 Rosa chinensis
RcHm_v2.0_Chr4g0439321 Rosa chinensis
RcHm_v2.0_Chr5g0045341 Rosa chinensis
Rhsim01G0005500 Rhododendron simsii
Sabra06G0130400 Salix brachista
Sabra18G0080700 Salix brachista
SalBow1G7127 Salvia bowleyana
SalBow6G0421 Salvia bowleyana
SalBow6G0700 Salvia bowleyana
SalBow6G1711 Salvia bowleyana
Sc18g0007470 Simmondsia chinensis
Sed0003509 Sechium edule
Sed0004345 Sechium edule
SEGI_27058 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06064 Striga asiatica
SGA_v2.0_scaffold17G07907 Striga asiatica
SGA_v2.0_scaffold66G22455 Striga asiatica
SGA_v2.0_scaffold69G23260 Striga asiatica
SMO146G0102 Selaginella moellendorffii
SMO364G0848 Selaginella moellendorffii
Solyc07g018210.3 Solanum lycopersicum
Solyc07g018220.3 Solanum lycopersicum
Solyc07g018230.2 Solanum lycopersicum
Sopen07g007320 Solanum pennellii
Sopen07g007330 Solanum pennellii
Sopen07g007350 Solanum pennellii
Sopen07g007360 Solanum pennellii
Sp3g32300 Schrenkiella parvula
Sp7g28140 Schrenkiella parvula
TAR383G0562 Trochodendron aralioides
TAR626G1505 Trochodendron aralioides
THA.LOC104803937 Tarenaya hassleriana
THA.LOC104819980 Tarenaya hassleriana
Thecc.06G060900 Theobroma cacao
Thhalv10025913m.g Eutrema salsugineum
TPR.G5416 Trifolium pratense
TWI12G0425 Tripterygium wilfordii
TWI12G0523 Tripterygium wilfordii
unitig_22.g6851 Utricularia gibba
unitig_8.g3424 Utricularia gibba
vmacro13120 Vaccinium macrocarpon
VMungo1215G1658 Vigna mungo
Zm00001eb146670 Zea mays
Zm00001eb289090 Zea mays
Zm00001eb366670 Zea mays

User provided reference genes

Program Settings