Gene: PGSC0003DMG401002421
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG401002421
- Transcript Identifier PGSC0003DMT400006219
- Gene Type Coding gene
- Location ST4.03ch07 : 11916961-11922551 : negative
Gene Family Information
- ID HOM05D003245
- #Genes/#Species 211/96
- Phylogenetic origin
- ID ORTHO05D004125
- #Genes/#Species 190/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pacid 37433678
- id PGSC0003DMG401002421.v4.03
- uniprot M0ZR00
Descriptions
- Description Integral membrane Yip1 family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT2G18840 |
| GO:0052324 | ISO | PLAZA Integrative Orthology | plant-type cell wall cellulose biosynthetic process | AT2G18840 |
| GO:0015774 | ISO | PLAZA Integrative Orthology | polysaccharide transport | AT2G18840 |
| GO:0009826 | ISO | PLAZA Integrative Orthology | unidimensional cell growth | AT2G18840 |
| GO:0051223 | ISO | PLAZA Integrative Orthology | regulation of protein transport | AT2G18840 |
| GO:0099402 | ISO | PLAZA Integrative Orthology | plant organ development | AT2G18840 |
| GO:0045489 | ISO | PLAZA Integrative Orthology | pectin biosynthetic process | AT2G18840 |
| GO:0048766 | ISO | PLAZA Integrative Orthology | root hair initiation | AT2G18840 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT2G18840 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G18840 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005802 | IBA | GOA Database | trans-Golgi network | |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT2G18840 |
| GO:0032588 | ISO | PLAZA Integrative Orthology | trans-Golgi network membrane | AT2G18840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006977 | Yip1 domain |
| Mapman id | Description |
|---|---|
| 22.5.3.2.2 | Vesicle trafficking.exocytic trafficking.secretory vesicle trafficking.ECHIDNA-YIP trafficking complex.component YIP4 |