Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33130 Brassica napus
A06p10350 Brassica napus
A06p43460 Brassica napus
Aa31LG1G690 Aethionema arabicum
Aa31LG2G7450 Aethionema arabicum
Actinidia04029 Actinidia chinensis
Actinidia31195 Actinidia chinensis
Ah.02g131270 Amaranthus hybridus
Ah.03g135320 Amaranthus hybridus
AL1G26240 Arabidopsis lyrata
AL5G12030 Arabidopsis lyrata
Aqoxy3G03326 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03W370 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9L8GEJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A0X5FR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BY5KCT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E3S8EN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FBF79B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TP47QD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WMRY2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2MKKS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XU3QCQ Arachis hypogaea
AT1G14350 Arabidopsis thaliana
AT2G02820 Arabidopsis thaliana
ATR0564G017 Amborella trichopoda
Atru.chr11.1835 Acer truncatum
AUR62005744 Chenopodium quinoa
AUR62028814 Chenopodium quinoa
BcaB02g06485 Brassica carinata
BcaB07g30321 Brassica carinata
BcaB08g34388 Brassica carinata
BcaC03g17170 Brassica carinata
BcaC05g25334 Brassica carinata
BcaC06g31215 Brassica carinata
BcaC06g34034 Brassica carinata
BcaC07g41578 Brassica carinata
BolC2t11184H Brassica oleracea
BolC5t29968H Brassica oleracea
BolC7t43861H Brassica oleracea
BolC8t52132H Brassica oleracea
BraA02t08336Z Brassica rapa
BraA06t24217Z Brassica rapa
BraA06t27231Z Brassica rapa
C02p50930 Brassica napus
C05p12150 Brassica napus
C07p33510 Brassica napus
C08p45790 Brassica napus
CAN.G512.9 Capsicum annuum
CANSAT64G1870 Cannabis sativa
CARHR014790 Cardamine hirsuta
CARHR145260 Cardamine hirsuta
Carub.0001s1405 Capsella rubella
Carub.0005s0173 Capsella rubella
Ca_04759_v3 Cicer arietinum L.
Ca_24255_v3 Cicer arietinum L.
Cc11_g13330 Coffea canephora
CDE05G2021 Ceratophyllum demersum
Cfa009008 Carpinus fangiana
Ciclev10031405m.g Citrus clementina
CiPaw.05G138200 Carya illinoinensis
CiPaw.06G082400 Carya illinoinensis
ClCG05G024470 Citrullus lanatus
COL.COLO4_22970 Corchorus olitorius
Cpa.g.sc183.27 Carica papaya
CsaV3_5G032490 Cucumis sativus L.
CSS0001932 Camellia sinensis var. sinensis
CSS0005353 Camellia sinensis var. sinensis
CSS0013069 Camellia sinensis var. sinensis
CSS0015674 Camellia sinensis var. sinensis
CSS0022785 Camellia sinensis var. sinensis
CSS0025207 Camellia sinensis var. sinensis
DCAR_007139 Daucus carota
DCAR_027399 Daucus carota
DCAR_031036 Daucus carota
Dinv24972 Davidia involucrata
Dinv34175 Davidia involucrata
Duzib248G0847 Durio zibethinus
Duzib251G0052 Durio zibethinus
Duzib268G1601 Durio zibethinus
ECA234G1152 Erigeron canadensis
ECA246G2002 Erigeron canadensis
EL10Ac6g13174 Beta vulgaris
Eucgr.B03417 Eucalyptus grandis
Eucgr.G02522 Eucalyptus grandis
FAN07G0117 Fragaria x ananassa
FAN07G0867 Fragaria x ananassa
FAN07G0887 Fragaria x ananassa
FAN11G3167 Fragaria x ananassa
FAN12G1936 Fragaria x ananassa
FAN12G3198 Fragaria x ananassa
FAN17G2873 Fragaria x ananassa
FAN22G0720 Fragaria x ananassa
FvH4_4g31660 Fragaria vesca
FvH4_4g37180 Fragaria vesca
Glyma.01G044300 Glycine max
Glyma.02G019300 Glycine max
Glyma.08G298200 Glycine max
Glyma.18G123600 Glycine max
Gohir.A03G098800 Gossypium hirsutum
Gohir.A13G072500 Gossypium hirsutum
Gohir.D02G114500 Gossypium hirsutum
Gohir.D13G072600 Gossypium hirsutum
Gorai.005G139500 Gossypium raimondii
Gorai.013G083300 Gossypium raimondii
GSVIVG01020038001 Vitis vinifera
HanXRQChr12g0382891 Helianthus annuus
HanXRQChr12g0382901 Helianthus annuus
HanXRQChr14g0429291 Helianthus annuus
HanXRQChr15g0485621 Helianthus annuus
HanXRQChr17g0570481 Helianthus annuus
Haze_12037 Corylus avellana
Hma1.2p1_0028F.1_g017840 Hydrangea macrophylla
Hma1.2p1_0598F.1_g186820 Hydrangea macrophylla
Hma1.2p1_3303F.1_g335050 Hydrangea macrophylla
HPP92_018584 Vanilla planifolia
Hund05899 Selenicereus undatus
Hund25259 Selenicereus undatus
Lalb_Chr04g0256211 Lupinus albus
Lalb_Chr10g0098091 Lupinus albus
Lalb_Chr17g0340491 Lupinus albus
Lalb_Chr17g0340501 Lupinus albus
Lj2g0000716 Lotus japonicus
Lj3A1041G81 Lonicera japonica
Lj6C792T7 Lonicera japonica
Lsat_1_v5_gn_3_51140 Lactuca sativa
Lsat_1_v5_gn_4_8620 Lactuca sativa
Lsat_1_v5_gn_8_53780 Lactuca sativa
Manes.01G188000 Manihot esculenta
Manes.05G098700 Manihot esculenta
MBI02_g05732_MAGBIO Magnolia biondii
MBI05_g00392_MAGBIO Magnolia biondii
MD12G1019400 Malus domestica
MD13G1075000 Malus domestica
MD16G1076100 Malus domestica
Medtr5g038910 Medicago truncatula
Medtr8g468380 Medicago truncatula
MELO3C012077.2 Cucumis melo
Migut.K00887 Erythranthe guttata
Migut.L01321 Erythranthe guttata
Migut.L01322 Erythranthe guttata
MSTRG.2355 Avicennia marina
MSTRG.683 Avicennia marina
MSTRG.7819 Avicennia marina
Nitab4.5_0003062g0070 Nicotiana tabacum
Nitab4.5_0007777g0020 Nicotiana tabacum
Nn3g17166 Nelumbo nucifera
Nn4g23087 Nelumbo nucifera
Oeu000624.1 Olea europaea
Oeu001583.1 Olea europaea
Oeu045418.2 Olea europaea
Os07g0627300 Oryza sativa ssp. japonica
Peaxi162Scf00503g00613 Petunia axillaris
PGR102G2966 Punica granatum
PGR119G0965 Punica granatum
PGSC0003DMG400002828 Solanum tuberosum
PGSC0003DMG400019699 Solanum tuberosum
PGSC0003DMG400025612 Solanum tuberosum
PGSC0003DMG400026758 Solanum tuberosum
Phvul.002G088900 Phaseolus vulgaris
Phvul.003G067800 Phaseolus vulgaris
Potri.008G148400 Populus trichocarpa
Potri.010G093000 Populus trichocarpa
Prupe.1G271100 Prunus persica
Psat0s3193g0160 Pisum sativum
Psat2g121880 Pisum sativum
Psat3g183440 Pisum sativum
Psat4g131320 Pisum sativum
PSO591G0240 Papaver somniferum
PSO832G0571 Papaver somniferum
QL03p064932 Quercus lobata
QL03p065003 Quercus lobata
QL03p065020 Quercus lobata
RcHm_v2.0_Chr4g0440161 Rosa chinensis
Rhsim12G0131400 Rhododendron simsii
RhsimUnG0242100 Rhododendron simsii
Sabra08G0113000 Salix brachista
Sabra10G0065500 Salix brachista
SalBow2G0575 Salvia bowleyana
SalBow2G2383 Salvia bowleyana
SalBow8G2806 Salvia bowleyana
Sc04g0008300 Simmondsia chinensis
Sc04g0008330 Simmondsia chinensis
Sc14g0008310 Simmondsia chinensis
Sed0001429 Sechium edule
Sed0020688 Sechium edule
SEGI_18054 Sequoiadendron giganteum
SEGI_26025 Sequoiadendron giganteum
SGA_v2.0_scaffold53G19435 Striga asiatica
SGA_v2.0_scaffold87G26950 Striga asiatica
Solyc04g005710.3 Solanum lycopersicum
Solyc05g007160.3 Solanum lycopersicum
Sopen04g001760 Solanum pennellii
Sopen05g003120 Solanum pennellii
Sp1g12720 Schrenkiella parvula
Sp2g13920 Schrenkiella parvula
TAR371G0708 Trochodendron aralioides
TAR374G1148 Trochodendron aralioides
TAR629G1941 Trochodendron aralioides
THA.LOC104805146 Tarenaya hassleriana
THA.LOC104824084 Tarenaya hassleriana
Thecc.02G352100 Theobroma cacao
Thhalv10004109m.g Eutrema salsugineum
Thhalv10007659m.g Eutrema salsugineum
TPR.G21932 Trifolium pratense
TPR.G33259 Trifolium pratense
TPR.G4084 Trifolium pratense
TWI75G0627 Tripterygium wilfordii
unitig_22.g6526 Utricularia gibba
unitig_8.g3200 Utricularia gibba
vmacro16338 Vaccinium macrocarpon
VMungo0251G2157 Vigna mungo
VMungo1215G0151 Vigna mungo
Zm00001eb109820 Zea mays

User provided reference genes

Program Settings