Gene: AT2G02820

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G02820
  • Transcript Identifier AT2G02820.2
  • Gene Type Coding gene
  • Location Chr2 : 804716-807139 : negative

Gene Family Information

  • ID HOM05D003202
  • #Genes/#Species 213/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G02820.2
  • symbol MYB88
  • Alias AtMYB88,myb domain protein 88
  • uniprot F4IRB4

Descriptions

  • Description myb domain protein 88
  • Computational description myb domain protein 88 (MYB88); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G14350.2); Has 8359 Blast hits to 7654 proteins in 549 species: Archae - 0; Bacteria - 2; Metazoa - 785; Fungi - 539; Plants - 5060; Viruses - 3; Other Eukaryotes - 1970 (source: NCBI BLink).
  • Computational description myb domain protein 88 (MYB88); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G14350.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010235
IMP
Gene Ontologyguard mother cell cytokinesis1
GO:0032875
IMP
Gene Ontologyregulation of DNA endoreduplication2
GO:1902806
IMP
Gene Ontologyregulation of cell cycle G1/S phase transition2
GO:0006355
IDA, IMP
IBA
Gene Ontologyregulation of transcription, DNA-templated3 4 5
GO:1901333
IMP
Gene Ontologypositive regulation of lateral root development6
GO:0009629
IMP
Gene Ontologyresponse to gravity7
GO:0048527
IMP
Gene Ontologylateral root development7
GO:0009554
IMP
Gene Ontologymegasporogenesis8
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0007049
IEA
GOA Databasecell cycle
GO:0009553
IMP
Gene Ontologyembryo sac development8
GO:1902584
IMP
Gene Ontologypositive regulation of response to water deprivation9
GO:1901002
IMP
Gene Ontologypositive regulation of response to salt stress9
GO:0050891
IMP
Gene Ontologymulticellular organismal water homeostasis9
GO:0009737
IMP
Gene Ontologyresponse to abscisic acid9
GO:2000037
IMP, IGI
Gene Ontologyregulation of stomatal complex patterning3 10
GO:0010444
IMP
Gene Ontologyguard mother cell differentiation3
GO:0010376
IMP
Gene Ontologystomatal complex formation3
GO:0010052
IGI
Gene Ontologyguard cell differentiation10

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding11
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific4
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding4
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding3
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity3 12

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)