Gene: AT2G02820
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G02820
- Transcript Identifier AT2G02820.2
- Gene Type Coding gene
- Location Chr2 : 804716-807139 : negative
Gene Family Information
- ID HOM05D003202
- #Genes/#Species 213/91
- Phylogenetic origin
- ID ORTHO05D003534
- #Genes/#Species 217/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G02820.2
- symbol MYB88
- Alias AtMYB88,myb domain protein 88
- uniprot F4IRB4
Descriptions
- Description myb domain protein 88
- Computational description myb domain protein 88 (MYB88); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G14350.2); Has 8359 Blast hits to 7654 proteins in 549 species: Archae - 0; Bacteria - 2; Metazoa - 785; Fungi - 539; Plants - 5060; Viruses - 3; Other Eukaryotes - 1970 (source: NCBI BLink).
- Computational description myb domain protein 88 (MYB88); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G14350.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010235 | IMP | Gene Ontology | guard mother cell cytokinesis | 1 |
GO:0032875 | IMP | Gene Ontology | regulation of DNA endoreduplication | 2 |
GO:1902806 | IMP | Gene Ontology | regulation of cell cycle G1/S phase transition | 2 |
GO:0006355 | IDA, IMP IBA | Gene Ontology | regulation of transcription, DNA-templated | 3 4 5 |
GO:1901333 | IMP | Gene Ontology | positive regulation of lateral root development | 6 |
GO:0009629 | IMP | Gene Ontology | response to gravity | 7 |
GO:0048527 | IMP | Gene Ontology | lateral root development | 7 |
GO:0009554 | IMP | Gene Ontology | megasporogenesis | 8 |
GO:0006357 | IEA | GOA Database | regulation of transcription by RNA polymerase II | |
GO:0007049 | IEA | GOA Database | cell cycle | |
GO:0009553 | IMP | Gene Ontology | embryo sac development | 8 |
GO:1902584 | IMP | Gene Ontology | positive regulation of response to water deprivation | 9 |
GO:1901002 | IMP | Gene Ontology | positive regulation of response to salt stress | 9 |
GO:0050891 | IMP | Gene Ontology | multicellular organismal water homeostasis | 9 |
GO:0009737 | IMP | Gene Ontology | response to abscisic acid | 9 |
GO:2000037 | IMP, IGI | Gene Ontology | regulation of stomatal complex patterning | 3 10 |
GO:0010444 | IMP | Gene Ontology | guard mother cell differentiation | 3 |
GO:0010376 | IMP | Gene Ontology | stomatal complex formation | 3 |
GO:0010052 | IGI | Gene Ontology | guard cell differentiation | 10 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IPI | Gene Ontology | protein binding | 11 |
GO:0000981 | IBA | Gene Ontology | DNA-binding transcription factor activity, RNA polymerase II-specific | 4 |
GO:0000978 | IBA | Gene Ontology | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 4 |
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0043565 | IDA | Gene Ontology | sequence-specific DNA binding | 3 |
GO:0003700 | IDA ISS | Gene Ontology | DNA-binding transcription factor activity | 3 12 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 4 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.2.1 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB) |