Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p44430 Brassica napus
Aa31LG4G1680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis
Actinidia26204 Actinidia chinensis
Actinidia33339 Actinidia chinensis
Actinidia33340 Actinidia chinensis
Actinidia33341 Actinidia chinensis
Actinidia33342 Actinidia chinensis
Ah.16g106160 Amaranthus hybridus
Aqoxy1G01380 Aquilegia oxysepala
Aqoxy1G03228 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2P0S20 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea
AT1G79350 Arabidopsis thaliana
ATR0794G028 Amborella trichopoda
Atru.chr1.22 Acer truncatum
AUR62041054 Chenopodium quinoa
AUR62043014 Chenopodium quinoa
BcaB02g08679 Brassica carinata
BcaB02g08681 Brassica carinata
BcaC08g47495 Brassica carinata
BolC2t09653H Brassica oleracea
BolC6t40342H Brassica oleracea
BraA07t31952Z Brassica rapa
C02p36530 Brassica napus
C06p53240 Brassica napus
CAN.G492.81 Capsicum annuum
CANSAT56G1976 Cannabis sativa
CARHR073010 Cardamine hirsuta
Carub.0002s2621 Capsella rubella
Ca_03187_v3 Cicer arietinum L.
Ca_22977_v3 Cicer arietinum L.
Ca_30144_v3 Cicer arietinum L.
CBR_g11926 Chara braunii
Cc00_g09100 Coffea canephora
Cc00_g09110 Coffea canephora
Cfa017765 Carpinus fangiana
Ciclev10004277m.g Citrus clementina
Ciclev10006112m.g Citrus clementina
CiPaw.15G111900 Carya illinoinensis
CiPaw.15G112000 Carya illinoinensis
ClCG02G018810 Citrullus lanatus
COL.COLO4_25000 Corchorus olitorius
COL.COLO4_25001 Corchorus olitorius
Cpa.g.sc32.147 Carica papaya
Cpa.g.sc32.149 Carica papaya
Cpa.g.sc32.155 Carica papaya
Cpa.g.sc32.156 Carica papaya
Cre01.g053250 Chlamydomonas reinhardtii
Cre02.g095045 Chlamydomonas reinhardtii
Cre02.g095047 Chlamydomonas reinhardtii
Cre02.g095051 Chlamydomonas reinhardtii
Cre02.g095052 Chlamydomonas reinhardtii
Cre02.g095054 Chlamydomonas reinhardtii
Cre07.g350100 Chlamydomonas reinhardtii
Cre13.g578501 Chlamydomonas reinhardtii
CsaV3_6G013370 Cucumis sativus L.
CSS0003080 Camellia sinensis var. sinensis
CSS0011288 Camellia sinensis var. sinensis
DCAR_013705 Daucus carota
DCAR_013706 Daucus carota
DCAR_016853 Daucus carota
Dinv19571 Davidia involucrata
Dinv42454 Davidia involucrata
Duzib213G0284 Durio zibethinus
ECA240G3251 Erigeron canadensis
EL10Ac2g03244 Beta vulgaris
Eucgr.F04478 Eucalyptus grandis
FAN11G1789 Fragaria x ananassa
FAN16G1231 Fragaria x ananassa
FAN21G1262 Fragaria x ananassa
FAN25G3213 Fragaria x ananassa
FvH4_3g13920 Fragaria vesca
Glyma.08G233702 Glycine max
Glyma.15G219200 Glycine max
Gohir.A13G126700 Gossypium hirsutum
Gohir.D13G130400 Gossypium hirsutum
Gorai.013G146500 Gossypium raimondii
GSVIVG01036703001 Vitis vinifera
HanXRQChr03g0077801 Helianthus annuus
HanXRQChr13g0408911 Helianthus annuus
HanXRQChr13g0408921 Helianthus annuus
HanXRQChr13g0408941 Helianthus annuus
HanXRQChr16g0505691 Helianthus annuus
Haze_18485 Corylus avellana
Haze_26591 Corylus avellana
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla
HPP92_005947 Vanilla planifolia
Hund12039 Selenicereus undatus
Hund20128 Selenicereus undatus
Lalb_Chr19g0133151 Lupinus albus
Lalb_Chr20g0108381 Lupinus albus
Lj2A8G61 Lonicera japonica
Lj2A8G63 Lonicera japonica
Lj3g0007581 Lotus japonicus
Lj3g0024633 Lotus japonicus
Lsat_1_v5_gn_7_69060 Lactuca sativa
Manes.16G048930 Manihot esculenta
Mapoly0153s0011 Marchantia polymorpha
MBI18_g37376_MAGBIO Magnolia biondii
MBI18_g40795_MAGBIO Magnolia biondii
MBI18_g42879_MAGBIO Magnolia biondii
MCO01G648 Micromonas commoda
MCO16G570 Micromonas commoda
MD05G1239900 Malus domestica
MD07G1097900 Malus domestica
MD10G1218000 Malus domestica
Medtr2g063620 Medicago truncatula
Medtr2g063813 Medicago truncatula
Medtr6g091930 Medicago truncatula
Medtr6g091960 Medicago truncatula
Medtr8g447090 Medicago truncatula
MELO3C019615.2 Cucumis melo
MELO3C035414.2 Cucumis melo
Migut.M01496 Erythranthe guttata
MSTRG.7098 Avicennia marina
Nitab4.5_0003291g0040 Nicotiana tabacum
Nitab4.5_0003291g0050 Nicotiana tabacum
Nitab4.5_0003291g0060 Nicotiana tabacum
Nitab4.5_0007774g0010 Nicotiana tabacum
Nitab4.5_0007774g0020 Nicotiana tabacum
Nitab4.5_0007774g0090 Nicotiana tabacum
Nitab4.5_0009958g0020 Nicotiana tabacum
Nitab4.5_0020695g0020 Nicotiana tabacum
Nn7g38410 Nelumbo nucifera
Nn7g38412 Nelumbo nucifera
Oeu005060.1 Olea europaea
Oeu005061.1 Olea europaea
Oeu025995.1 Olea europaea
Oeu025996.1 Olea europaea
Oeu029454.1 Olea europaea
Oeu029455.1 Olea europaea
Oeu032680.1 Olea europaea
Os04g0609700 Oryza sativa ssp. japonica
Os08g0223700 Oryza sativa ssp. japonica
Os08g0223766 Oryza sativa ssp. japonica
Os08g0223833 Oryza sativa ssp. japonica
Peaxi162Scf00166g00077 Petunia axillaris
Peaxi162Scf00420g00518 Petunia axillaris
Peaxi162Scf00670g00216 Petunia axillaris
PGR031G0700 Punica granatum
PGSC0003DMG400011248 Solanum tuberosum
Phvul.011G180100 Phaseolus vulgaris
Potri.002G262101 Populus trichocarpa
Potri.008G081200 Populus trichocarpa
Potri.010G174900 Populus trichocarpa
Pp3c3_5410 Physcomitrium patens
PRCOL_00005992 Prasinoderma coloniale
Prupe.4G126100 Prunus persica
Psat0s11g0040 Pisum sativum
Psat4g185200 Pisum sativum
PSO541G6458 Papaver somniferum
PSO675G7315 Papaver somniferum
QL04p010784 Quercus lobata
QL04p095737 Quercus lobata
QL04p095761 Quercus lobata
RcHm_v2.0_Chr5g0023151 Rosa chinensis
Rhsim02G0183500 Rhododendron simsii
Rhsim06G0106300 Rhododendron simsii
Rhsim06G0244800 Rhododendron simsii
RhsimUnG0048600 Rhododendron simsii
Sabra10G0134700 Salix brachista
Sc06g0001640 Simmondsia chinensis
Sed0006985 Sechium edule
SEGI_01096 Sequoiadendron giganteum
SEGI_09386 Sequoiadendron giganteum
SEGI_10615 Sequoiadendron giganteum
SEGI_14617 Sequoiadendron giganteum
SEGI_24184 Sequoiadendron giganteum
SEGI_25392 Sequoiadendron giganteum
SEGI_28838 Sequoiadendron giganteum
SEGI_39235 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40168 Striga asiatica
SGA_v2.0_scaffold26G11263 Striga asiatica
SGA_v2.0_scaffold4G01863 Striga asiatica
SMO358G0497 Selaginella moellendorffii
Solyc10g005490.4 Solanum lycopersicum
Sopen10g001470 Solanum pennellii
Sp5g34410 Schrenkiella parvula
TAR627G0022 Trochodendron aralioides
TAR629G1197 Trochodendron aralioides
THA.LOC104812392 Tarenaya hassleriana
Thecc.07G189500 Theobroma cacao
Thhalv10000387m.g Eutrema salsugineum
Thhalv10000653m.g Eutrema salsugineum
Thhalv10018021m.g Eutrema salsugineum
TPR.G14822 Trifolium pratense
TPR.G19390 Trifolium pratense
TPR.G20402 Trifolium pratense
TPR.G30141 Trifolium pratense
TPR.G36062 Trifolium pratense
TPR.G3613 Trifolium pratense
TPR.G3619 Trifolium pratense
TPR.G3623 Trifolium pratense
TPR.G3624 Trifolium pratense
TPR.G36388 Trifolium pratense
TPR.G373 Trifolium pratense
TPR.G39754 Trifolium pratense
TPR.G40025 Trifolium pratense
TPR.G40298 Trifolium pratense
TPR.G7301 Trifolium pratense
TWI38G0104 Tripterygium wilfordii
TWI38G0597 Tripterygium wilfordii
unitig_32.g11074 Utricularia gibba
vmacro22494 Vaccinium macrocarpon
VMungo1127G0192 Vigna mungo
VMungo1127G0472 Vigna mungo
VMungo1127G0538 Vigna mungo
VMungo1127G0791 Vigna mungo
VMungo1383G3180 Vigna mungo
Zm00001eb413950 Zea mays
Zm00001eb430630 Zea mays

User provided reference genes

Program Settings