Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16030 Brassica napus
A03p55470 Brassica napus
A08p21390 Brassica napus
Aa31LG4G9790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5109 Anthoceros agrestis
Actinidia08960 Actinidia chinensis
Actinidia24597 Actinidia chinensis
Actinidia24598 Actinidia chinensis
Ah.11g051160 Amaranthus hybridus
AL7G28510 Arabidopsis lyrata
Aqoxy328s002 Aquilegia oxysepala
Aqoxy328s003 Aquilegia oxysepala
Aqoxy3G01217 Aquilegia oxysepala
Aqoxy3G02978 Aquilegia oxysepala
Aqoxy3G03011 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RZMV9E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UDW2C6 Arachis hypogaea
AT4G24690 Arabidopsis thaliana
ATR0824G119 Amborella trichopoda
Atru.chr9.2574 Acer truncatum
Atru.chr9.2575 Acer truncatum
Atru.chr9.2576 Acer truncatum
AUR62008147 Chenopodium quinoa
AUR62028729 Chenopodium quinoa
BcaB03g12442 Brassica carinata
BcaC06g32868 Brassica carinata
BcaC07g38161 Brassica carinata
BcaC09g50840 Brassica carinata
BolC1t01929H Brassica oleracea
BolC3t16652H Brassica oleracea
BolC7t45866H Brassica oleracea
BolC8t48585H Brassica oleracea
BraA01t01537Z Brassica rapa
BraA03t14620Z Brassica rapa
BraA08t34089Z Brassica rapa
C01p20020 Brassica napus
C07p53750 Brassica napus
CAN.G338.32 Capsicum annuum
CAN.G993.20 Capsicum annuum
CANSAT01G2926 Cannabis sativa
CANSAT80G2678 Cannabis sativa
CARHR232070 Cardamine hirsuta
Carub.0007s1637 Capsella rubella
Ca_03503_v3 Cicer arietinum L.
Ca_14277_v3 Cicer arietinum L.
CBR_g19475 Chara braunii
Cc04_g11550 Coffea canephora
CDE02G1794 Ceratophyllum demersum
CDE04G2303 Ceratophyllum demersum
Cfa019214 Carpinus fangiana
Cfa025644 Carpinus fangiana
Ciclev10024152m.g Citrus clementina
CiPaw.11G019800 Carya illinoinensis
CiPaw.11G019900 Carya illinoinensis
CiPaw.11G020100 Carya illinoinensis
CiPaw.11G020200 Carya illinoinensis
CiPaw.11G020300 Carya illinoinensis
CiPaw.11G020400 Carya illinoinensis
CiPaw.11G020500 Carya illinoinensis
ClCG01G013500 Citrullus lanatus
ClCG03G002990 Citrullus lanatus
COL.COLO4_24272 Corchorus olitorius
COL.COLO4_36761 Corchorus olitorius
Cpa.g.sc159.22 Carica papaya
Cpa.g.sc159.27 Carica papaya
CsaV3_1G008830 Cucumis sativus L.
CSS0041144 Camellia sinensis var. sinensis
DCAR_016024 Daucus carota
DCAR_016453 Daucus carota
DCAR_016454 Daucus carota
DCAR_021588 Daucus carota
DCAR_026172 Daucus carota
Dinv15230 Davidia involucrata
Dinv20600 Davidia involucrata
Dinv38527 Davidia involucrata
ECA232G1718 Erigeron canadensis
ECA232G3241 Erigeron canadensis
ECA247G1428 Erigeron canadensis
EL10Ac5g10658 Beta vulgaris
Eucgr.K02800 Eucalyptus grandis
FAN04G1049 Fragaria x ananassa
FAN04G1965 Fragaria x ananassa
FAN08G1011 Fragaria x ananassa
FAN08G3352 Fragaria x ananassa
FAN13G0746 Fragaria x ananassa
FAN13G2541 Fragaria x ananassa
FAN18G2478 Fragaria x ananassa
FAN18G2672 Fragaria x ananassa
FvH4_5g06081 Fragaria vesca
FvH4_5g06270 Fragaria vesca
Glyma.05G041600 Glycine max
Glyma.17G084700 Glycine max
Gohir.A03G056900 Gossypium hirsutum
Gohir.A11G040300 Gossypium hirsutum
Gohir.D03G106700 Gossypium hirsutum
Gohir.D11G043500 Gossypium hirsutum
Gorai.003G115800 Gossypium raimondii
Gorai.007G046900 Gossypium raimondii
GSVIVG01007647001 Vitis vinifera
HanXRQChr10g0296081 Helianthus annuus
HanXRQChr16g0504701 Helianthus annuus
Haze_07584 Corylus avellana
HPP92_006279 Vanilla planifolia
HPP92_024706 Vanilla planifolia
Hund02785 Selenicereus undatus
Lalb_Chr07g0182971 Lupinus albus
Lalb_Chr12g0201891 Lupinus albus
Lalb_Chr13g0297581 Lupinus albus
Lj4g0014353 Lotus japonicus
Lj5A130T68 Lonicera japonica
Lj9A442T64 Lonicera japonica
Lsat_1_v5_gn_1_27780 Lactuca sativa
Lsat_1_v5_gn_4_77240 Lactuca sativa
Lsat_1_v5_gn_8_131800 Lactuca sativa
Lsat_1_v5_gn_8_1421 Lactuca sativa
Manes.06G110100 Manihot esculenta
Manes.14G060700 Manihot esculenta
Mapoly0039s0049 Marchantia polymorpha
Mapoly0039s0050 Marchantia polymorpha
Mapoly0039s0051 Marchantia polymorpha
Mapoly0100s0042 Marchantia polymorpha
MBI19_g29861_MAGBIO Magnolia biondii
MD06G1165900 Malus domestica
MD06G1166000 Malus domestica
MD14G1171800 Malus domestica
Medtr4g104880 Medicago truncatula
Medtr4g104890 Medicago truncatula
Medtr4g104900 Medicago truncatula
Medtr4g104940 Medicago truncatula
Medtr4g104950 Medicago truncatula
Medtr4g104960 Medicago truncatula
Medtr4g104980 Medicago truncatula
Medtr4g104990 Medicago truncatula
Medtr5g006810 Medicago truncatula
MELO3C002297.2 Cucumis melo
Migut.D01995 Erythranthe guttata
Migut.K00603 Erythranthe guttata
Migut.O00156 Erythranthe guttata
Migut.O00157 Erythranthe guttata
MSTRG.11494 Avicennia marina
MSTRG.9691 Avicennia marina
Nitab4.5_0000003g0820 Nicotiana tabacum
Nitab4.5_0001793g0010 Nicotiana tabacum
Nitab4.5_0008713g0020 Nicotiana tabacum
Nitab4.5_0010452g0010 Nicotiana tabacum
Nn3g16701 Nelumbo nucifera
Oeu020884.3 Olea europaea
Oeu023452.2 Olea europaea
Oeu040857.2 Olea europaea
Os02g0593700 Oryza sativa ssp. japonica
Os04g0476800 Oryza sativa ssp. japonica
Peaxi162Scf00089g01334 Petunia axillaris
Peaxi162Scf00763g00430 Petunia axillaris
PGR044G1972 Punica granatum
PGSC0003DMG400007563 Solanum tuberosum
PGSC0003DMG400018122 Solanum tuberosum
PGSC0003DMG400027073 Solanum tuberosum
Phvul.003G205000 Phaseolus vulgaris
Potri.012G085450 Populus trichocarpa
Potri.012G085700 Populus trichocarpa
Potri.015G084000 Populus trichocarpa
Pp3c11_16970 Physcomitrium patens
Pp3c7_8990 Physcomitrium patens
Prupe.5G165800 Prunus persica
Prupe.5G165900 Prunus persica
Psat4g060880 Pisum sativum
Psat4g060960 Pisum sativum
PSO017G1918 Papaver somniferum
PSO111G0086 Papaver somniferum
PSO229G0055 Papaver somniferum
PSO754G0123 Papaver somniferum
QL10p006899 Quercus lobata
RcHm_v2.0_Chr7g0192591 Rosa chinensis
RcHm_v2.0_Chr7g0192771 Rosa chinensis
Rhsim08G0177500 Rhododendron simsii
Rhsim12G0167900 Rhododendron simsii
Sabra12G0061600 Salix brachista
Sabra15G0107200 Salix brachista
SalBow6G1229 Salvia bowleyana
Sc12g0005010 Simmondsia chinensis
Sed0005003 Sechium edule
Sed0026079 Sechium edule
SEGI_11452 Sequoiadendron giganteum
SEGI_31497 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31812 Striga asiatica
SGA_v2.0_scaffold25G10800 Striga asiatica
SGA_v2.0_scaffold7G04161 Striga asiatica
SHI17273 Sapria himalayana
SMO132G0003 Selaginella moellendorffii
Solyc03g112230.4 Solanum lycopersicum
Solyc06g071770.4 Solanum lycopersicum
Sopen03g031330 Solanum pennellii
Sopen06g028060 Solanum pennellii
Sp7g22680 Schrenkiella parvula
TAR371G0612 Trochodendron aralioides
TAR622G1022 Trochodendron aralioides
TAR629G0508 Trochodendron aralioides
THA.LOC104809775 Tarenaya hassleriana
THA.LOC104815519 Tarenaya hassleriana
THA.LOC104825177 Tarenaya hassleriana
Thecc.03G025700 Theobroma cacao
Thhalv10024557m.g Eutrema salsugineum
TPR.G37470 Trifolium pratense
TPR.G37494 Trifolium pratense
TPR.G37497 Trifolium pratense
TWI14G1342 Tripterygium wilfordii
TWI23G0818 Tripterygium wilfordii
unitig_37.g12746 Utricularia gibba
vmacro16645 Vaccinium macrocarpon
vmacro19300 Vaccinium macrocarpon
VMungo1215G0567 Vigna mungo
Zm00001eb079700 Zea mays
Zm00001eb127620 Zea mays
Zm00001eb245950 Zea mays
Zm00001eb386690 Zea mays
Zm00001eb386700 Zea mays

User provided reference genes

Program Settings