Gene: PGSC0003DMG400018122

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400018122
  • Transcript Identifier PGSC0003DMT400046670
  • Gene Type Coding gene
  • Location ST4.03ch03 : 52122063-52125813 : negative

Gene Family Information

  • ID HOM05D003157
  • #Genes/#Species 216/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37460814
  • id PGSC0003DMG400018122.v4.03
  • uniprot M1BJF6

Descriptions

  • Description Zinc ion binding protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006914
IEA
GOA Databaseautophagy
GO:0006952
IEA
GOA Databasedefense response
GO:0015031
IEA
GOA Databaseprotein transport
GO:0050832
IDA
GOA Databasedefense response to fungus
GO:0051258
ISO
PLAZA Integrative Orthologyprotein polymerization AT4G24690
GO:0071211
ISO
PLAZA Integrative Orthologyprotein targeting to vacuole involved in autophagy AT4G24690

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
GOA Databaseprotein binding
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT4G24690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
IEA
GOA Databasevacuole
GO:0005776
IEA
GOA Databaseautophagosome
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G24690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000270 PB1 domain
IPR009060 UBA-like superfamily
IPR000433 Zinc finger, ZZ-type
IPR032350 Next to BRCA1, central domain
IPR013783 Immunoglobulin-like fold
IPR043145 Zinc finger, ZZ-type superfamily
Mapman id Description
19.3.3.1.2 Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (NBR1)