Gene: Sopen03g031330

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g031330
  • Transcript Identifier Sopen03g031330.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 66976020-66979780 : negative

Gene Family Information

  • ID HOM05D003157
  • #Genes/#Species 216/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g031330.1

Descriptions

  • Description ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p , Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Zinc finger, ZZ-type
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051258
ISO
PLAZA Integrative Orthologyprotein polymerization AT4G24690
GO:0071211
ISO
PLAZA Integrative Orthologyprotein targeting to vacuole involved in autophagy AT4G24690
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus PGSC0003DMG400018122

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
InterProzinc ion binding
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT4G24690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G24690
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G24690
GO:0005776
ISO
PLAZA Integrative Orthologyautophagosome AT4G24690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043145 Zinc finger, ZZ-type superfamily
IPR000270 PB1 domain
IPR032350 Next to BRCA1, central domain
IPR013783 Immunoglobulin-like fold
IPR000433 Zinc finger, ZZ-type
IPR009060 UBA-like superfamily
Mapman id Description
19.3.3.1.2 Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (NBR1)