Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25220 Brassica napus
A06p27910 Brassica napus
A06p27920 Brassica napus
Aa31LG4G17330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.72 Anthoceros agrestis
Actinidia18320 Actinidia chinensis
Ah.02g114690 Amaranthus hybridus
Ah.11g046580 Amaranthus hybridus
AL5G28290 Arabidopsis lyrata
AL5G28300 Arabidopsis lyrata
AL6G34940 Arabidopsis lyrata
AL6G51300 Arabidopsis lyrata
Aqoxy3G01793 Aquilegia oxysepala
Aqoxy4G02206 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0IR88Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0KJ6B5 Arachis hypogaea
AT3G48780 Arabidopsis thaliana
AT3G48790 Arabidopsis thaliana
AT5G23670 Arabidopsis thaliana
ATR0661G050 Amborella trichopoda
Atru.chr6.2634 Acer truncatum
AUR62029525 Chenopodium quinoa
AUR62034784 Chenopodium quinoa
BcaB02g09566 Brassica carinata
BcaB02g10618 Brassica carinata
BcaB05g22987 Brassica carinata
BcaC01g02375 Brassica carinata
BcaC01g02376 Brassica carinata
BcaC09g49902 Brassica carinata
BolC1t03083H Brassica oleracea
BolC3t18853H Brassica oleracea
BolC3t18854H Brassica oleracea
BraA01t02432Z Brassica rapa
BraA06t25732Z Brassica rapa
BraA06t25733Z Brassica rapa
C01p31490 Brassica napus
C03p65950 Brassica napus
C03p65960 Brassica napus
CAN.G27.68 Capsicum annuum
CAN.G437.11 Capsicum annuum
CAN.G637.14 Capsicum annuum
CAN.G65.80 Capsicum annuum
CANSAT64G2804 Cannabis sativa
CARHR157550 Cardamine hirsuta
CARHR157560 Cardamine hirsuta
CARHR157570 Cardamine hirsuta
CARHR157580 Cardamine hirsuta
CARHR157590 Cardamine hirsuta
CARHR157600 Cardamine hirsuta
CARHR189870 Cardamine hirsuta
Carub.0005s1495 Capsella rubella
Carub.0006s2142 Capsella rubella
Ca_26476_v3 Cicer arietinum L.
CBR_g54204 Chara braunii
CBR_g8908 Chara braunii
Cc04_g09460 Coffea canephora
CDE02G2903 Ceratophyllum demersum
CDE06G1270 Ceratophyllum demersum
Cfa007178 Carpinus fangiana
Cfa018729 Carpinus fangiana
Cfa024797 Carpinus fangiana
Cfa025927 Carpinus fangiana
Ciclev10015046m.g Citrus clementina
Ciclev10017847m.g Citrus clementina
CiPaw.11G002100 Carya illinoinensis
CiPaw.11G002200 Carya illinoinensis
ClCG06G018230 Citrullus lanatus
COL.COLO4_13342 Corchorus olitorius
COL.COLO4_16693 Corchorus olitorius
Cpa.g.sc70.85 Carica papaya
Cre04.g230144 Chlamydomonas reinhardtii
CsaV3_1G000200 Cucumis sativus L.
CSS0030402 Camellia sinensis var. sinensis
DCAR_021415 Daucus carota
DCAR_026256 Daucus carota
Dinv11216 Davidia involucrata
Dinv23199 Davidia involucrata
Duzib068G1399 Durio zibethinus
Duzib084G0449 Durio zibethinus
Duzib264G0999 Durio zibethinus
ECA246G0036 Erigeron canadensis
ECA246G2584 Erigeron canadensis
EL10Ac5g11331 Beta vulgaris
Eucgr.K02201 Eucalyptus grandis
FAN02G3734 Fragaria x ananassa
FAN05G2586 Fragaria x ananassa
FAN05G3970 Fragaria x ananassa
FAN09G4122 Fragaria x ananassa
FAN14G1125 Fragaria x ananassa
FvH4_6g54160 Fragaria vesca
Glyma.02G065400 Glycine max
Glyma.16G146500 Glycine max
Gohir.A12G192800 Gossypium hirsutum
Gohir.D12G194900 Gossypium hirsutum
Gorai.008G209600 Gossypium raimondii
GSVIVG01008621001 Vitis vinifera
GSVIVG01033008001 Vitis vinifera
HanXRQChr05g0152901 Helianthus annuus
HanXRQChr09g0273591 Helianthus annuus
HanXRQChr10g0288551 Helianthus annuus
Haze_07121 Corylus avellana
Haze_14931 Corylus avellana
Haze_27059 Corylus avellana
Hma1.2p1_0093F.1_g047030 Hydrangea macrophylla
HPP92_001930 Vanilla planifolia
HPP92_001937 Vanilla planifolia
Hund02483 Selenicereus undatus
Hund10073 Selenicereus undatus
Lalb_Chr02g0156801 Lupinus albus
Lalb_Chr14g0363921 Lupinus albus
Lalb_Chr22g0360011 Lupinus albus
Lj4g0003714 Lotus japonicus
Lj5C91G2 Lonicera japonica
Lj9C484T8 Lonicera japonica
Lsat_1_v5_gn_5_10500 Lactuca sativa
Manes.04G091700 Manihot esculenta
Manes.06G124900 Manihot esculenta
Manes.14G046600 Manihot esculenta
Mapoly0006s0093 Marchantia polymorpha
MBI07_g36276_MAGBIO Magnolia biondii
MBI11_g37086_MAGBIO Magnolia biondii
MCO09G764 Micromonas commoda
MD04G1167400 Malus domestica
MD06G1133500 Malus domestica
MD09G1004800 Malus domestica
MD09G1269700 Malus domestica
MD11G1011200 Malus domestica
MD11G1011300 Malus domestica
MD11G1067700 Malus domestica
MD17G1008800 Malus domestica
Medtr6g033290 Medicago truncatula
MELO3C026175.2 Cucumis melo
Migut.D01228 Erythranthe guttata
MSTRG.22883 Avicennia marina
MSTRG.9347 Avicennia marina
Nitab4.5_0000146g0070 Nicotiana tabacum
Nitab4.5_0001180g0130 Nicotiana tabacum
Nitab4.5_0003066g0060 Nicotiana tabacum
Nn3g16315 Nelumbo nucifera
Nn4g22188 Nelumbo nucifera
Nn4g24164 Nelumbo nucifera
Oeu030644.1 Olea europaea
Os01g0928600 Oryza sativa ssp. japonica
Os01g0928700 Oryza sativa ssp. japonica
Os01g0928800 Oryza sativa ssp. japonica
Os11g0516000 Oryza sativa ssp. japonica
Peaxi162Scf00171g00522 Petunia axillaris
Peaxi162Scf00358g00620 Petunia axillaris
Peaxi162Scf00643g00660 Petunia axillaris
PGR044G0798 Punica granatum
PGSC0003DMG400017785 Solanum tuberosum
PGSC0003DMG400026961 Solanum tuberosum
PGSC0003DMG400031057 Solanum tuberosum
Phvul.004G071100 Phaseolus vulgaris
Potri.012G104500 Populus trichocarpa
Potri.015G103800 Populus trichocarpa
Pp3c5_18790 Physcomitrium patens
Pp3c5_18804 Physcomitrium patens
Pp3c8_7120 Physcomitrium patens
PRCOL_00003312 Prasinoderma coloniale
PRCOL_00004803 Prasinoderma coloniale
Prupe.3G312000 Prunus persica
Prupe.5G144700 Prunus persica
Psat1g097640 Pisum sativum
PSO017G2895 Papaver somniferum
PSO229G0086 Papaver somniferum
PSO229G0106 Papaver somniferum
PSO478G2975 Papaver somniferum
PSO675G1150 Papaver somniferum
PSO675G3711 Papaver somniferum
PSO675G8470 Papaver somniferum
QL02p069970 Quercus lobata
QL02p070001 Quercus lobata
QL10p001065 Quercus lobata
RcHm_v2.0_Chr2g0176331 Rosa chinensis
Rhsim08G0195100 Rhododendron simsii
Sabra12G0076900 Salix brachista
Sabra15G0123500 Salix brachista
Sabra15G0123600 Salix brachista
Sc04g0000300 Simmondsia chinensis
Sed0009874 Sechium edule
SGA_v2.0_scaffold40G15635 Striga asiatica
SGA_v2.0_scaffold72G24182 Striga asiatica
SGA_v2.0_scaffold74G24702 Striga asiatica
SHI14208 Sapria himalayana
SHI14212 Sapria himalayana
SMO347G0225 Selaginella moellendorffii
Solyc04g024910.1 Solanum lycopersicum
Solyc06g030590.3 Solanum lycopersicum
Solyc06g072320.4 Solanum lycopersicum
Sopen03g028920 Solanum pennellii
Sopen06g009940 Solanum pennellii
Sopen06g028690 Solanum pennellii
Sp5g13240 Schrenkiella parvula
TAR371G0736 Trochodendron aralioides
TAR629G0860 Trochodendron aralioides
THA.LOC104798919 Tarenaya hassleriana
Thecc.03G137600 Theobroma cacao
Thecc.04G044900 Theobroma cacao
Thhalv10004251m.g Eutrema salsugineum
Thhalv10010322m.g Eutrema salsugineum
TPR.G36680 Trifolium pratense
TWI32G1334 Tripterygium wilfordii
TWI34G0005 Tripterygium wilfordii
unitig_0.g1257 Utricularia gibba
unitig_0.g1258 Utricularia gibba
unitig_61.g26378 Utricularia gibba
unitig_61.g26379 Utricularia gibba
vmacro19160 Vaccinium macrocarpon
VMungo0464G2149 Vigna mungo
Zm00001eb023770 Zea mays
Zm00001eb085250 Zea mays
Zm00001eb113010 Zea mays
Zm00001eb134550 Zea mays
Zm00001eb167610 Zea mays
Zm00001eb168600 Zea mays
Zm00001eb170230 Zea mays
Zm00001eb170240 Zea mays
Zm00001eb326110 Zea mays
Zm00001eb326120 Zea mays
Zm00001eb363730 Zea mays
Zm00001eb393370 Zea mays
Zm00001eb433790 Zea mays

User provided reference genes

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