Gene: Thecc.03G137600

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.03G137600
  • Transcript Identifier Thecc.03G137600.1
  • Gene Type Coding gene
  • Location Chromosome_3 : 25170259-25174752 : positive

Gene Family Information

  • ID HOM05D003078
  • #Genes/#Species 223/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.03G137600.v2.1
  • pacid 41997451
  • ancestorIdentifier Thecc1EG014726.CGDv1.1
  • ancestorIdentifier Thecc1EG014726t2.CGDv1.1

Descriptions

  • Description Long chain base2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009058
IEA
InterProbiosynthetic process
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT3G48780
GO:0046512
ISO
PLAZA Integrative Orthologysphingosine biosynthetic process AT5G23670
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G48780
GO:0043067
ISO
PLAZA Integrative Orthologyregulation of programmed cell death AT5G23670
GO:0030148
ISO
PLAZA Integrative Orthologysphingolipid biosynthetic process AT3G48780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G23670
GO:0004758
ISO
PLAZA Integrative Orthologyserine C-palmitoyltransferase activity AT3G48780

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT5G23670
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G23670
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G23670

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015424 Pyridoxal phosphate-dependent transferase
IPR004839 Aminotransferase, class I/classII
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
Mapman id Description
5.4.1.2 Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase complex.catalytic subunit LCB2