Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p65740 Brassica napus
A05p04170 Brassica napus
A09p02310 Brassica napus
Aa31LG1G25700 Aethionema arabicum
Aa31LG5G2540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3782 Anthoceros agrestis
Actinidia05749 Actinidia chinensis
Actinidia15630 Actinidia chinensis
Actinidia26527 Actinidia chinensis
Actinidia30908 Actinidia chinensis
Ah.05g168480 Amaranthus hybridus
Ah.08g210590 Amaranthus hybridus
AL4G42900 Arabidopsis lyrata
AL6G49940 Arabidopsis lyrata
Aqoxy1G00295 Aquilegia oxysepala
Aqoxy2G03191 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DPV4Y1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IVXM4E Arachis hypogaea
AT2G44020 Arabidopsis thaliana
AT4G02990 Arabidopsis thaliana
ATR0564G477 Amborella trichopoda
ATR0626G245 Amborella trichopoda
Atru.chr13.1879 Acer truncatum
Atru.chr5.1331 Acer truncatum
AUR62022324 Chenopodium quinoa
AUR62034384 Chenopodium quinoa
AUR62041195 Chenopodium quinoa
BcaB01g01992 Brassica carinata
BcaB02g08924 Brassica carinata
BcaC02g12344 Brassica carinata
BcaC09g50603 Brassica carinata
BolC4t22125H Brassica oleracea
BolC9t53173H Brassica oleracea
BraA03t15625Z Brassica rapa
BraA05t19403Z Brassica rapa
BraA09t35880Z Brassica rapa
C04p04940 Brassica napus
C09p02420 Brassica napus
CAN.G44.9 Capsicum annuum
CAN.G492.42 Capsicum annuum
CANSAT25G1264 Cannabis sativa
CANSAT25G2219 Cannabis sativa
CARHR139180 Cardamine hirsuta
CARHR251380 Cardamine hirsuta
Carub.0004s2658 Capsella rubella
Carub.0006s3406 Capsella rubella
Ca_17273_v3 Cicer arietinum L.
Ca_26741_v3 Cicer arietinum L.
CBR_g26328 Chara braunii
Cc05_g00150 Coffea canephora
Cc09_g00240 Coffea canephora
CDE01G0187 Ceratophyllum demersum
CDE06G1245 Ceratophyllum demersum
CDE12G0394 Ceratophyllum demersum
Cfa006080 Carpinus fangiana
Cfa018219 Carpinus fangiana
Ciclev10000930m.g Citrus clementina
Ciclev10019732m.g Citrus clementina
CiPaw.08G102000 Carya illinoinensis
CiPaw.16G005800 Carya illinoinensis
ClCG09G022090 Citrullus lanatus
ClCG10G013530 Citrullus lanatus
COL.COLO4_13997 Corchorus olitorius
Cpa.g.sc151.12 Carica papaya
Cpa.g.sc9.127 Carica papaya
CsaV3_3G043110 Cucumis sativus L.
CsaV3_5G025020 Cucumis sativus L.
CSS0006169 Camellia sinensis var. sinensis
CSS0013111 Camellia sinensis var. sinensis
DCAR_018383 Daucus carota
DCAR_029545 Daucus carota
Dinv13070 Davidia involucrata
Dinv37420 Davidia involucrata
Dinv41812 Davidia involucrata
Dinv44719 Davidia involucrata
Duzib133G0824 Durio zibethinus
Duzib147G0362 Durio zibethinus
ECA247G3292 Erigeron canadensis
ECA248G1159 Erigeron canadensis
EL10Ac2g03279 Beta vulgaris
Eucgr.A01358 Eucalyptus grandis
Eucgr.F02687 Eucalyptus grandis
FAN15G0472 Fragaria x ananassa
FAN19G2769 Fragaria x ananassa
FAN19G2893 Fragaria x ananassa
FAN20G0589 Fragaria x ananassa
FAN23G2662 Fragaria x ananassa
FAN24G0322 Fragaria x ananassa
FAN26G1081 Fragaria x ananassa
FAN27G3496 Fragaria x ananassa
FAN28G0969 Fragaria x ananassa
FAN28G2937 Fragaria x ananassa
FAN28G2975 Fragaria x ananassa
FvH4_1g27270 Fragaria vesca
FvH4_1g27350 Fragaria vesca
FvH4_2g24160 Fragaria vesca
Glyma.02G223000 Glycine max
Glyma.05G239200 Glycine max
Glyma.08G046300 Glycine max
Gohir.A02G108506 Gossypium hirsutum
Gohir.A02G108507 Gossypium hirsutum
Gohir.A08G070700 Gossypium hirsutum
Gohir.D03G069704 Gossypium hirsutum
Gohir.D08G078500 Gossypium hirsutum
Gorai.003G090600 Gossypium raimondii
Gorai.004G084100 Gossypium raimondii
GSVIVG01011061001 Vitis vinifera
GSVIVG01015207001 Vitis vinifera
HanXRQChr09g0245761 Helianthus annuus
HanXRQChr15g0466591 Helianthus annuus
Haze_04770 Corylus avellana
Haze_17884 Corylus avellana
Hma1.2p1_0244F.1_g101100 Hydrangea macrophylla
Hma1.2p1_0276F.1_g111320 Hydrangea macrophylla
Hma1.2p1_2405F.1_g321440 Hydrangea macrophylla
HPP92_006942 Vanilla planifolia
HPP92_020942 Vanilla planifolia
Lalb_Chr05g0222181 Lupinus albus
Lalb_Chr10g0103071 Lupinus albus
Lalb_Chr12g0210631 Lupinus albus
Lalb_Chr16g0387491 Lupinus albus
Lj1C43T9 Lonicera japonica
Lj4g0013449 Lotus japonicus
Lj9P646T34 Lonicera japonica
LjContig00155g0015255 Lotus japonicus
Lsat_1_v5_gn_2_2900 Lactuca sativa
Lsat_1_v5_gn_2_2920 Lactuca sativa
Lsat_1_v5_gn_4_41901 Lactuca sativa
Lsat_1_v5_gn_9_1861 Lactuca sativa
Manes.02G188300 Manihot esculenta
Manes.05G071900 Manihot esculenta
Mapoly0118s0031 Marchantia polymorpha
MBI02_g13010_MAGBIO Magnolia biondii
MD03G1271600 Malus domestica
MD07G1031000 Malus domestica
MD11G1292200 Malus domestica
Medtr1g115415 Medicago truncatula
Medtr5g068860 Medicago truncatula
Medtr8g105560 Medicago truncatula
MELO3C002988.2 Cucumis melo
MELO3C026620.2 Cucumis melo
Migut.M01453 Erythranthe guttata
Migut.N01700 Erythranthe guttata
MSTRG.14895 Avicennia marina
MSTRG.25046 Avicennia marina
Nitab4.5_0000014g0060 Nicotiana tabacum
Nitab4.5_0000166g0070 Nicotiana tabacum
Nitab4.5_0004159g0060 Nicotiana tabacum
Nitab4.5_0006035g0020 Nicotiana tabacum
Nitab4.5_0006577g0010 Nicotiana tabacum
Nitab4.5_0007740g0020 Nicotiana tabacum
Nn3g16735 Nelumbo nucifera
Nn4g26127 Nelumbo nucifera
Oeu013054.1 Olea europaea
Oeu013056.1 Olea europaea
Oeu025972.1 Olea europaea
Oeu037405.1 Olea europaea
Os02g0783100 Oryza sativa ssp. japonica
Os05g0404000 Oryza sativa ssp. japonica
Os09g0440600 Oryza sativa ssp. japonica
Peaxi162Scf00476g00615 Petunia axillaris
Peaxi162Scf00643g00011 Petunia axillaris
Peaxi162Scf00901g00035 Petunia axillaris
PGR042G2939 Punica granatum
PGR119G2365 Punica granatum
PGSC0003DMG400002856 Solanum tuberosum
PGSC0003DMG400009215 Solanum tuberosum
Phvul.002G321600 Phaseolus vulgaris
Phvul.008G189000 Phaseolus vulgaris
Potri.013G116700 Populus trichocarpa
Potri.014G137400 Populus trichocarpa
Pp3c14_12200 Physcomitrium patens
Pp3c1_25410 Physcomitrium patens
Pp3c22_840 Physcomitrium patens
Prupe.8G049300 Prunus persica
Prupe.8G247800 Prunus persica
Psat0s3022g0080 Pisum sativum
Psat7g007760 Pisum sativum
PSO170G5832 Papaver somniferum
PSO302G0303 Papaver somniferum
PSO447G0109 Papaver somniferum
QL01p029266 Quercus lobata
QL07p030484 Quercus lobata
QL07p031555 Quercus lobata
QL07p034901 Quercus lobata
RcHm_v2.0_Chr3g0488701 Rosa chinensis
RcHm_v2.0_Chr6g0291971 Rosa chinensis
Rhsim04G0038200 Rhododendron simsii
Rhsim06G0087300 Rhododendron simsii
Sabra13G0098800 Salix brachista
Sabra14G0103800 Salix brachista
Sabra19G0097500 Salix brachista
Sabra19G0101000 Salix brachista
SalBow4G1505 Salvia bowleyana
SalBow8G0021 Salvia bowleyana
SalBow8G1752 Salvia bowleyana
SalBow8G4812 Salvia bowleyana
SalBow8G5301 Salvia bowleyana
Sc05g0005190 Simmondsia chinensis
Sc08g0007760 Simmondsia chinensis
Sed0026481 Sechium edule
Sed0028102 Sechium edule
SEGI_16761 Sequoiadendron giganteum
SEGI_30231 Sequoiadendron giganteum
SEGI_39211 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03687 Striga asiatica
SGA_v2.0_scaffold95G28735 Striga asiatica
SHI09181 Sapria himalayana
SMO116G0319 Selaginella moellendorffii
SMO139G0112 Selaginella moellendorffii
Solyc04g005630.3 Solanum lycopersicum
Solyc11g017050.1 Solanum lycopersicum
Sopen04g001670 Solanum pennellii
Sopen11g009040 Solanum pennellii
Sp4g26110 Schrenkiella parvula
Sp6g03030 Schrenkiella parvula
TAR365G0295 Trochodendron aralioides
TAR376G0603 Trochodendron aralioides
TAR636G0072 Trochodendron aralioides
THA.LOC104804390 Tarenaya hassleriana
THA.LOC104826004 Tarenaya hassleriana
Thecc.01G124400 Theobroma cacao
Thecc.01G285800 Theobroma cacao
Thecc.09G243600 Theobroma cacao
Thhalv10001406m.g Eutrema salsugineum
Thhalv10028570m.g Eutrema salsugineum
TPR.G34335 Trifolium pratense
TPR.G5844 Trifolium pratense
TWI59G0181 Tripterygium wilfordii
TWI79G0180 Tripterygium wilfordii
unitig_37.g11911 Utricularia gibba
unitig_37.g11912 Utricularia gibba
unitig_748.g7863 Utricularia gibba
vmacro19244 Vaccinium macrocarpon
VMungo0251G0115 Vigna mungo
VMungo0647G2494 Vigna mungo
Zm00001eb192920 Zea mays
Zm00001eb349900 Zea mays

User provided reference genes

Program Settings