Gene: Pp3c14_12200
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c14_12200
- Transcript Identifier Pp3c14_12200V3.2
- Gene Type Coding gene
- Location Chr14 : 7774469-7776232 : negative
Gene Family Information
- ID HOM05D002901
- #Genes/#Species 238/96
- Phylogenetic origin
- ID ORTHO05D003183
- #Genes/#Species 239/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c14_12200V3.2
- pacid 32960739
- alias Pp1s36_216V6
- alias Phypa_161831
- alias Phpat.014G046100
- uniprot A0A2K1JHL5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0006353 | IEA | GOA Database | DNA-templated transcription, termination | |
GO:0032502 | IBA | GOA Database | developmental process | |
GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | Zm00001eb349900 |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G02990 |
GO:0042254 | ISO | PLAZA Integrative Orthology | ribosome biogenesis | Zm00001eb349900 |
GO:0042793 | ISO | PLAZA Integrative Orthology | plastid transcription | AT4G02990 |
GO:0042794 | ISO | PLAZA Integrative Orthology | plastid rRNA transcription | AT4G02990 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003690 | IEA | GOA Database | double-stranded DNA binding | |
GO:0003690 | IEA | InterPro | double-stranded DNA binding | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G02990 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | Zm00001eb349900 |
GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT4G02990 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.6.2.2 | RNA biosynthesis.organelle machinery.transcriptional regulation.transcription factor (mTERF) |