Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33310 Brassica napus
A02p33320 Brassica napus
A06p12970 Brassica napus
A06p12980 Brassica napus
A09p60630 Brassica napus
Aa31LG11G5630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.341 Anthoceros agrestis
Actinidia08787 Actinidia chinensis
Actinidia24632 Actinidia chinensis
Actinidia27037 Actinidia chinensis
Actinidia27038 Actinidia chinensis
Ah.12g063970 Amaranthus hybridus
Ah.12g064150 Amaranthus hybridus
AL1G29240 Arabidopsis lyrata
AL4G40710 Arabidopsis lyrata
Aqoxy1G02234 Aquilegia oxysepala
Aqoxy1G02235 Aquilegia oxysepala
Aqoxy2G00924 Aquilegia oxysepala
Aqoxy6G01663 Aquilegia oxysepala
Aqoxy6G01664 Aquilegia oxysepala
Aqoxy6G01674 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01UMM0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2Q8IWK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S0X35P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T623PT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VWPR3S Arachis hypogaea
AT1G17070 Arabidopsis thaliana
AT2G42330 Arabidopsis thaliana
ATR1098G071 Amborella trichopoda
Atru.chr12.1814 Acer truncatum
Atru.chr6.914 Acer truncatum
AUR62014872 Chenopodium quinoa
AUR62024879 Chenopodium quinoa
AUR62030668 Chenopodium quinoa
AUR62031080 Chenopodium quinoa
AUR62031081 Chenopodium quinoa
BcaB01g03443 Brassica carinata
BcaB02g06683 Brassica carinata
BcaB03g13020 Brassica carinata
BcaC01g05289 Brassica carinata
BcaC01g05293 Brassica carinata
BcaC01g05295 Brassica carinata
BcaC01g05303 Brassica carinata
BcaC01g05306 Brassica carinata
BcaC03g17201 Brassica carinata
BcaC05g25671 Brassica carinata
BcaC07g41394 Brassica carinata
BcaC07g41444 Brassica carinata
BolC2t11216H Brassica oleracea
BolC3t15186H Brassica oleracea
BolC5t30252H Brassica oleracea
BolC5t30253H Brassica oleracea
BolC8t51957H Brassica oleracea
BraA06t24456Z Brassica rapa
BraA09t41433Z Brassica rapa
C02p51260 Brassica napus
C03p28160 Brassica napus
C05p15440 Brassica napus
C05p15450 Brassica napus
C08p44090 Brassica napus
CAN.G492.37 Capsicum annuum
CARHR017600 Cardamine hirsuta
CARHR137380 Cardamine hirsuta
Carub.0001s1679 Capsella rubella
Ca_23166_v3 Cicer arietinum L.
CBR_g50354 Chara braunii
Cc05_g11170 Coffea canephora
Cc07_g20660 Coffea canephora
Cc07_g20670 Coffea canephora
CDE02G0573 Ceratophyllum demersum
CDE05G1238 Ceratophyllum demersum
Cfa016110 Carpinus fangiana
Cfa027224 Carpinus fangiana
Ciclev10015230m.g Citrus clementina
Ciclev10017761m.g Citrus clementina
Ciclev10018077m.g Citrus clementina
Ciclev10030682m.g Citrus clementina
Ciclev10031700m.g Citrus clementina
CiPaw.05G210800 Carya illinoinensis
ClCG02G007900 Citrullus lanatus
COL.COLO4_00251 Corchorus olitorius
COL.COLO4_09043 Corchorus olitorius
COL.COLO4_09508 Corchorus olitorius
COL.COLO4_24093 Corchorus olitorius
COL.COLO4_24094 Corchorus olitorius
COL.COLO4_32216 Corchorus olitorius
COL.COLO4_32217 Corchorus olitorius
COL.COLO4_33467 Corchorus olitorius
Cpa.g.sc43.153 Carica papaya
Cre07.g325713 Chlamydomonas reinhardtii
CsaV3_2G035840 Cucumis sativus L.
CSS0044416 Camellia sinensis var. sinensis
DCAR_009032 Daucus carota
DCAR_009599 Daucus carota
DCAR_011062 Daucus carota
DCAR_022992 Daucus carota
Dinv04696 Davidia involucrata
Dinv04697 Davidia involucrata
Dinv36250 Davidia involucrata
Duzib128G1532 Durio zibethinus
ECA247G0541 Erigeron canadensis
ECA247G1085 Erigeron canadensis
EL10Ac2g02592 Beta vulgaris
Eucgr.G00703 Eucalyptus grandis
Eucgr.G00836 Eucalyptus grandis
Eucgr.G00845 Eucalyptus grandis
FAN04G0489 Fragaria x ananassa
FAN07G1578 Fragaria x ananassa
FAN08G1317 Fragaria x ananassa
FAN12G4041 Fragaria x ananassa
FAN14G0049 Fragaria x ananassa
FAN14G1119 Fragaria x ananassa
FAN14G1151 Fragaria x ananassa
FAN18G3509 Fragaria x ananassa
FAN20G0159 Fragaria x ananassa
FAN20G1914 Fragaria x ananassa
FAN20G2215 Fragaria x ananassa
FAN24G1302 Fragaria x ananassa
FAN26G0286 Fragaria x ananassa
FAN26G2125 Fragaria x ananassa
FAN27G1849 Fragaria x ananassa
FAN28G1870 Fragaria x ananassa
FvH4_2g25582 Fragaria vesca
FvH4_4g03135 Fragaria vesca
FvH4_4g13670 Fragaria vesca
FvH4_5g27320 Fragaria vesca
Glyma.02G073100 Glycine max
Glyma.16G154400 Glycine max
Glyma.18G031866 Glycine max
Glyma.18G031932 Glycine max
Gohir.A11G221200 Gossypium hirsutum
Gohir.D10G191600 Gossypium hirsutum
Gohir.D11G234700 Gossypium hirsutum
Gorai.007G247300 Gossypium raimondii
Gorai.011G214400 Gossypium raimondii
GSVIVG01024262001 Vitis vinifera
HanXRQChr10g0291501 Helianthus annuus
HanXRQChr15g0463941 Helianthus annuus
Haze_00347 Corylus avellana
Hma1.2p1_1059F.1_g253030 Hydrangea macrophylla
HPP92_017274 Vanilla planifolia
HPP92_017275 Vanilla planifolia
Lalb_Chr09g0328871 Lupinus albus
Lalb_Chr16g0385381 Lupinus albus
Lj1g0022689 Lotus japonicus
Lj5P331T27 Lonicera japonica
Lj5P331T31 Lonicera japonica
Lj9A25T22 Lonicera japonica
Lj9C24T10 Lonicera japonica
Lj9C25T5 Lonicera japonica
Lj9P219T21 Lonicera japonica
Lju926C12T4 Lonicera japonica
Lsat_1_v5_gn_9_37500 Lactuca sativa
Lsat_1_v5_gn_9_37520 Lactuca sativa
Manes.09G098002 Manihot esculenta
Manes.09G130600 Manihot esculenta
Mapoly0085s0035 Marchantia polymorpha
Mapoly0121s0014 Marchantia polymorpha
MBI02_g25679_MAGBIO Magnolia biondii
MCO06G176 Micromonas commoda
MD08G1250100 Malus domestica
MD15G1445100 Malus domestica
Medtr7g070290 Medicago truncatula
Medtr7g070300 Medicago truncatula
Medtr8g010350 Medicago truncatula
MELO3C024757.2 Cucumis melo
Migut.F00929 Erythranthe guttata
MSTRG.22435 Avicennia marina
MSTRG.8559 Avicennia marina
Nitab4.5_0009225g0010 Nicotiana tabacum
Nn3g21896 Nelumbo nucifera
Oeu027900.2 Olea europaea
Oeu028990.1 Olea europaea
Os12g0615800 Oryza sativa ssp. japonica
Peaxi162Scf00017g01725 Petunia axillaris
Peaxi162Scf01026g00001 Petunia axillaris
PGR031G2485 Punica granatum
PGR142G0302 Punica granatum
PGSC0003DMG400014409 Solanum tuberosum
Phvul.004G082100 Phaseolus vulgaris
Potri.013G076000 Populus trichocarpa
Potri.019G043200 Populus trichocarpa
Pp3c19_6430 Physcomitrium patens
Pp3c22_1740 Physcomitrium patens
Pp3c22_1760 Physcomitrium patens
PRCOL_00003671 Prasinoderma coloniale
Prupe.1G587200 Prunus persica
Prupe.5G048700 Prunus persica
Prupe.7G002000 Prunus persica
Psat4g207720 Pisum sativum
PSO339G6595 Papaver somniferum
PSO384G0661 Papaver somniferum
QL03p062749 Quercus lobata
QL03p062784 Quercus lobata
QL03p066723 Quercus lobata
RcHm_v2.0_Chr4g0414401 Rosa chinensis
RcHm_v2.0_Chr4g0414501 Rosa chinensis
RcHm_v2.0_Chr6g0293801 Rosa chinensis
RcHm_v2.0_Chr6g0293811 Rosa chinensis
RcHm_v2.0_Chr7g0218481 Rosa chinensis
Rhsim03G0225400 Rhododendron simsii
Rhsim06G0232100 Rhododendron simsii
Sabra13G0065200 Salix brachista
Sabra19G0053900 Salix brachista
Sc06g0010130 Simmondsia chinensis
Sc09g0008520 Simmondsia chinensis
Sc09g0008530 Simmondsia chinensis
Sc09g0008540 Simmondsia chinensis
Sc09g0008570 Simmondsia chinensis
Sc11g0002190 Simmondsia chinensis
Sed0003802 Sechium edule
Sed0007587 Sechium edule
SEGI_23967 Sequoiadendron giganteum
SGA_v2.0_scaffold39G15236 Striga asiatica
SHI02598 Sapria himalayana
SMO165G0034 Selaginella moellendorffii
Solyc10g005990.4 Solanum lycopersicum
Sopen10g001950 Solanum pennellii
Sp1g15190 Schrenkiella parvula
TAR375G0529 Trochodendron aralioides
TAR633G0361 Trochodendron aralioides
TAR633G2735 Trochodendron aralioides
THA.LOC104805726 Tarenaya hassleriana
THA.LOC104823791 Tarenaya hassleriana
Thecc.05G227100 Theobroma cacao
Thhalv10006789m.g Eutrema salsugineum
TPR.G2005 Trifolium pratense
TPR.G26966 Trifolium pratense
TPR.G27642 Trifolium pratense
TPR.G29541 Trifolium pratense
TPR.G4447 Trifolium pratense
TPR.G6614 Trifolium pratense
TPR.G9789 Trifolium pratense
TWI38G1169 Tripterygium wilfordii
unitig_21.g20691 Utricularia gibba
VMungo0464G0921 Vigna mungo
Zm00001eb135930 Zea mays
Zm00001eb426490 Zea mays

User provided reference genes

Program Settings