Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p30860 Brassica napus
A03p50540 Brassica napus
A09p22860 Brassica napus
Aa31LG6G340 Aethionema arabicum
Aa31sc58G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2157 Anthoceros agrestis
Actinidia01034 Actinidia chinensis
Actinidia10865 Actinidia chinensis
Actinidia31493 Actinidia chinensis
Ah.07g199180 Amaranthus hybridus
Ah.12g054000 Amaranthus hybridus
AL7G37000 Arabidopsis lyrata
AL8G10970 Arabidopsis lyrata
Aqoxy180s009 Aquilegia oxysepala
Aqoxy180s010 Aquilegia oxysepala
Aqoxy3G02655 Aquilegia oxysepala
Aqoxy3G02656 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ALKQ9T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BV80JU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YIXS33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z0I5FU Arachis hypogaea
AT4G17600 Arabidopsis thaliana
AT5G47110 Arabidopsis thaliana
ATR0665G506 Amborella trichopoda
ATR0665G546 Amborella trichopoda
ATR1047G001 Amborella trichopoda
Atru.chr6.1975 Acer truncatum
Atru.chr9.1211 Acer truncatum
AUR62007164 Chenopodium quinoa
AUR62018842 Chenopodium quinoa
BcaB07g30792 Brassica carinata
BcaC03g16940 Brassica carinata
BcaC04g21645 Brassica carinata
BcaC06g31415 Brassica carinata
BcaC06g33557 Brassica carinata
BcaC06g34285 Brassica carinata
BcaC09g49367 Brassica carinata
BcaNung03455 Brassica carinata
BcaNung06052 Brassica carinata
BolC2t10872H Brassica oleracea
BolC7t43622H Brassica oleracea
BolC7t45395H Brassica oleracea
BolC9t55808H Brassica oleracea
BraA02t08099Z Brassica rapa
BraA03t14143Z Brassica rapa
BraA06t27400Z Brassica rapa
BraA09t37888Z Brassica rapa
C02p48420 Brassica napus
C07p30810 Brassica napus
C07p48870 Brassica napus
C09p29440 Brassica napus
CAN.G564.16 Capsicum annuum
CAN.G572.7 Capsicum annuum
CAN.G845.20 Capsicum annuum
CANSAT21G1182 Cannabis sativa
CANSAT56G0024 Cannabis sativa
CARHR174280 Cardamine hirsuta
CARHR224320 Cardamine hirsuta
Carub.0007s2379 Capsella rubella
Carub.0008s0064 Capsella rubella
Ca_22013_v3 Cicer arietinum L.
CBR_g89141 Chara braunii
Cc08_g11360 Coffea canephora
CDE02G1116 Ceratophyllum demersum
CDE04G2971 Ceratophyllum demersum
CDE11G0044 Ceratophyllum demersum
CDE11G0936 Ceratophyllum demersum
Cfa012324 Carpinus fangiana
Cfa013605 Carpinus fangiana
Ciclev10021868m.g Citrus clementina
Ciclev10033513m.g Citrus clementina
CiPaw.07G183000 Carya illinoinensis
CiPaw.11G072900 Carya illinoinensis
CiPaw.12G055800 Carya illinoinensis
ClCG07G017170 Citrullus lanatus
ClCG10G002240 Citrullus lanatus
COL.COLO4_07199 Corchorus olitorius
COL.COLO4_37307 Corchorus olitorius
Cpa.g.sc13.220 Carica papaya
Cpa.g.sc98.27 Carica papaya
Cre03.g199535 Chlamydomonas reinhardtii
CsaV3_3G002280 Cucumis sativus L.
CsaV3_3G002290 Cucumis sativus L.
CsaV3_4G004370 Cucumis sativus L.
CSS0003465 Camellia sinensis var. sinensis
CSS0038832 Camellia sinensis var. sinensis
DCAR_005585 Daucus carota
DCAR_014645 Daucus carota
Dinv25133 Davidia involucrata
Dinv28875 Davidia involucrata
Duzib068G0843 Durio zibethinus
Duzib205G0050 Durio zibethinus
ECA233G4390 Erigeron canadensis
ECA238G0207 Erigeron canadensis
ECA240G0003 Erigeron canadensis
EL10Ac5g12275 Beta vulgaris
Eucgr.A02934 Eucalyptus grandis
Eucgr.E00355 Eucalyptus grandis
FAN01G0831 Fragaria x ananassa
FAN03G0116 Fragaria x ananassa
FAN04G2804 Fragaria x ananassa
FAN06G0263 Fragaria x ananassa
FAN08G3190 Fragaria x ananassa
FAN10G4374 Fragaria x ananassa
FAN13G2006 Fragaria x ananassa
FAN18G0247 Fragaria x ananassa
FvH4_5g20330 Fragaria vesca
FvH4_7g26541 Fragaria vesca
Glyma.01G204700 Glycine max
Glyma.05G066100 Glycine max
Glyma.17G147900 Glycine max
Gohir.A07G044700 Gossypium hirsutum
Gohir.A08G163300 Gossypium hirsutum
Gohir.A12G213000 Gossypium hirsutum
Gohir.D07G049200 Gossypium hirsutum
Gohir.D08G183100 Gossypium hirsutum
Gohir.D12G215500 Gossypium hirsutum
Gorai.001G052300 Gossypium raimondii
Gorai.004G192200 Gossypium raimondii
Gorai.008G231100 Gossypium raimondii
GSVIVG01003693001 Vitis vinifera
GSVIVG01004637001 Vitis vinifera
GSVIVG01024474001 Vitis vinifera
HanXRQChr03g0089741 Helianthus annuus
HanXRQChr07g0198111 Helianthus annuus
HanXRQChr13g0418271 Helianthus annuus
Haze_06655 Corylus avellana
Haze_08372 Corylus avellana
Haze_08378 Corylus avellana
Haze_22226 Corylus avellana
Hma1.2p1_0840F.1_g226610 Hydrangea macrophylla
Hma1.2p1_1014F.1_g247900 Hydrangea macrophylla
Hma1.2p1_1439F.1_g283490 Hydrangea macrophylla
Hma1.2p1_2647F.1_g326040 Hydrangea macrophylla
Hma1.2p1_2647F.1_g326050 Hydrangea macrophylla
HPP92_014883 Vanilla planifolia
Hund11318 Selenicereus undatus
Lalb_Chr05g0220921 Lupinus albus
Lalb_Chr16g0386441 Lupinus albus
Lj1A973T46 Lonicera japonica
Lj1C972T4 Lonicera japonica
Lj4g0023884 Lotus japonicus
Lj8A276T43 Lonicera japonica
Lsat_1_v5_gn_2_127261 Lactuca sativa
Lsat_1_v5_gn_6_95120 Lactuca sativa
Manes.01G088500 Manihot esculenta
Manes.02G045000 Manihot esculenta
Manes.14G041200 Manihot esculenta
Mapoly0001s0043 Marchantia polymorpha
MBI04_g13853_MAGBIO Magnolia biondii
MCO07G694 Micromonas commoda
MD01G1174500 Malus domestica
MD04G1055800 Malus domestica
MD06G1047300 Malus domestica
Medtr4g099330 Medicago truncatula
Medtr4g099340 Medicago truncatula
MELO3C013899.2 Cucumis melo
MELO3C017629.2 Cucumis melo
Migut.E00893 Erythranthe guttata
Migut.E01635 Erythranthe guttata
Migut.F00543 Erythranthe guttata
Migut.K01377 Erythranthe guttata
MSTRG.1952 Avicennia marina
Nitab4.5_0000103g0210 Nicotiana tabacum
Nitab4.5_0000185g0170 Nicotiana tabacum
Nitab4.5_0000500g0220 Nicotiana tabacum
Nitab4.5_0006594g0060 Nicotiana tabacum
Nitab4.5_0009451g0010 Nicotiana tabacum
Nitab4.5_0014508g0020 Nicotiana tabacum
Nn1g00765 Nelumbo nucifera
Nn6g33762 Nelumbo nucifera
Nn6g33763 Nelumbo nucifera
Oeu017207.1 Olea europaea
Oeu026431.1 Olea europaea
Oeu040672.1 Olea europaea
Oeu040673.1 Olea europaea
Os02g0125700 Oryza sativa ssp. japonica
Peaxi162Scf00040g00095 Petunia axillaris
Peaxi162Scf00102g00088 Petunia axillaris
Peaxi162Scf00301g00033 Petunia axillaris
PGR042G0534 Punica granatum
PGR042G1604 Punica granatum
PGSC0003DMG400008343 Solanum tuberosum
PGSC0003DMG400020492 Solanum tuberosum
PGSC0003DMG400026245 Solanum tuberosum
Phvul.003G225000 Phaseolus vulgaris
Potri.001G151300 Populus trichocarpa
Potri.003G083500 Populus trichocarpa
Pp3c14_9180 Physcomitrium patens
Pp3c14_9190 Physcomitrium patens
Pp3c1_26740 Physcomitrium patens
Pp3c21_10880 Physcomitrium patens
Pp3c2_19700 Physcomitrium patens
PRCOL_00003530 Prasinoderma coloniale
Prupe.2G269900 Prunus persica
Prupe.5G057100 Prunus persica
Psat4g075640 Pisum sativum
PSO063G1214 Papaver somniferum
PSO063G1887 Papaver somniferum
PSO782G0833 Papaver somniferum
PSO782G1883 Papaver somniferum
QL09p027352 Quercus lobata
QL12p008813 Quercus lobata
RcHm_v2.0_Chr1g0373221 Rosa chinensis
RcHm_v2.0_Chr7g0205511 Rosa chinensis
Rhsim07G0119300 Rhododendron simsii
Rhsim09G0188400 Rhododendron simsii
Sabra01G0121200 Salix brachista
Sabra03G0054100 Salix brachista
Sabra04G0063000 Salix brachista
Sabra15G0132900 Salix brachista
SalBow3G4192 Salvia bowleyana
SalBow8G2480 Salvia bowleyana
Sc01g0008000 Simmondsia chinensis
Sed0007170 Sechium edule
Sed0008351 Sechium edule
Sed0026673 Sechium edule
SEGI_29426 Sequoiadendron giganteum
SGA_v2.0_scaffold60G20848 Striga asiatica
SGA_v2.0_scaffold6G03162 Striga asiatica
SMO171G0078 Selaginella moellendorffii
Solyc03g094000.3 Solanum lycopersicum
Solyc08g007180.3 Solanum lycopersicum
Solyc08g077880.3 Solanum lycopersicum
Sopen03g024850 Solanum pennellii
Sopen08g003130 Solanum pennellii
Sopen08g026390 Solanum pennellii
Sp2g11920 Schrenkiella parvula
Sp7g16560 Schrenkiella parvula
TAR272G0001 Trochodendron aralioides
TAR375G0308 Trochodendron aralioides
TAR375G0892 Trochodendron aralioides
TAR636G1068 Trochodendron aralioides
THA.LOC104812817 Tarenaya hassleriana
Thecc.03G240800 Theobroma cacao
Thhalv10000997m.g Eutrema salsugineum
TPR.G17131 Trifolium pratense
TWI15G0197 Tripterygium wilfordii
TWI60G0531 Tripterygium wilfordii
unitig_52.g17215 Utricularia gibba
vmacro14123 Vaccinium macrocarpon
VMungo0251G3117 Vigna mungo
Zm00001eb208700 Zea mays
Zm00001eb230870 Zea mays

User provided reference genes

Program Settings