Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41720 Brassica napus
A06p28440 Brassica napus
A09p07450 Brassica napus
Aa31LG11G1690 Aethionema arabicum
Aa31LG3G19030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4187 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.535 Anthoceros agrestis
Actinidia08916 Actinidia chinensis
Actinidia08917 Actinidia chinensis
Actinidia18284 Actinidia chinensis
Actinidia18285 Actinidia chinensis
Actinidia25505 Actinidia chinensis
Actinidia36849 Actinidia chinensis
Actinidia36850 Actinidia chinensis
Ah.02g114500 Amaranthus hybridus
AL6G17610 Arabidopsis lyrata
AL8G38550 Arabidopsis lyrata
Aqoxy5G02975 Aquilegia oxysepala
Aqoxy5G02978 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0R3YHS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.68M1NE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BGA7XW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UMKY0Z Arachis hypogaea
AT5G07340 Arabidopsis thaliana
AT5G61790 Arabidopsis thaliana
ATR0582G294 Amborella trichopoda
Atru.chr6.1947 Acer truncatum
AUR62032201 Chenopodium quinoa
AUR62036970 Chenopodium quinoa
BcaB02g09602 Brassica carinata
BcaB07g29820 Brassica carinata
BcaC01g02430 Brassica carinata
BcaC03g18097 Brassica carinata
BcaC04g23435 Brassica carinata
BcaNung01418 Brassica carinata
BolC2t12222H Brassica oleracea
BolC3t18424H Brassica oleracea
BolC3t18425H Brassica oleracea
BolC3t18791H Brassica oleracea
BolC9t53746H Brassica oleracea
BraA02t09112Z Brassica rapa
BraA06t25788Z Brassica rapa
BraA09t36399Z Brassica rapa
C02p61640 Brassica napus
C03p65370 Brassica napus
C09p08360 Brassica napus
CAN.G1008.43 Capsicum annuum
CAN.G1089.10 Capsicum annuum
CANSAT01G2108 Cannabis sativa
CARHR205810 Cardamine hirsuta
CARHR275550 Cardamine hirsuta
Carub.0006s0631 Capsella rubella
Carub.0008s2248 Capsella rubella
Ca_16816_v3 Cicer arietinum L.
Ca_17049_v3 Cicer arietinum L.
CBR_g37934 Chara braunii
Cc04_g05660 Coffea canephora
CDE01G0427 Ceratophyllum demersum
CDE01G0805 Ceratophyllum demersum
CDE02G0583 Ceratophyllum demersum
CDE02G3664 Ceratophyllum demersum
CDE02G4212 Ceratophyllum demersum
CDE02G4673 Ceratophyllum demersum
CDE06G2082 Ceratophyllum demersum
CDE09G0637 Ceratophyllum demersum
CDE10G1016 Ceratophyllum demersum
CDE12G0764 Ceratophyllum demersum
Cfa009472 Carpinus fangiana
Cfa018693 Carpinus fangiana
Ciclev10028154m.g Citrus clementina
Ciclev10031185m.g Citrus clementina
CiPaw.05G098000 Carya illinoinensis
CiPaw.05G098100 Carya illinoinensis
CiPaw.05G098300 Carya illinoinensis
ClCG03G004060 Citrullus lanatus
COL.COLO4_37279 Corchorus olitorius
Cpa.g.sc13.192 Carica papaya
Cpa.g.sc13.193 Carica papaya
Cre07.g357900 Chlamydomonas reinhardtii
CsaV3_1G009950 Cucumis sativus L.
CSS0000281 Camellia sinensis var. sinensis
CSS0029055 Camellia sinensis var. sinensis
DCAR_000796 Daucus carota
DCAR_016330 Daucus carota
DCAR_016948 Daucus carota
DCAR_021220 Daucus carota
DCAR_025633 Daucus carota
DCAR_028513 Daucus carota
Dinv13698 Davidia involucrata
Dinv13699 Davidia involucrata
Dinv23242 Davidia involucrata
Duzib068G1470 Durio zibethinus
Duzib084G1314 Durio zibethinus
Duzib205G0551 Durio zibethinus
ECA232G4009 Erigeron canadensis
ECA246G1995 Erigeron canadensis
EL10Ac5g11263 Beta vulgaris
Eucgr.B03570 Eucalyptus grandis
FAN04G0934 Fragaria x ananassa
FAN07G0660 Fragaria x ananassa
FAN08G2697 Fragaria x ananassa
FAN13G1534 Fragaria x ananassa
FAN17G0809 Fragaria x ananassa
FAN18G1310 Fragaria x ananassa
FvH4_4g22170 Fragaria vesca
FvH4_5g09940 Fragaria vesca
Glyma.04G202900 Glycine max
Glyma.05G199200 Glycine max
Glyma.06G162600 Glycine max
Glyma.08G006500 Glycine max
Gohir.A07G045900 Gossypium hirsutum
Gohir.A09G248200 Gossypium hirsutum
Gohir.A11G039000 Gossypium hirsutum
Gohir.A12G194600 Gossypium hirsutum
Gohir.D07G050300 Gossypium hirsutum
Gohir.D09G249200 Gossypium hirsutum
Gohir.D11G042300 Gossypium hirsutum
Gohir.D12G197000 Gossypium hirsutum
Gorai.001G053400 Gossypium raimondii
Gorai.006G273500 Gossypium raimondii
Gorai.007G045500 Gossypium raimondii
Gorai.008G211600 Gossypium raimondii
GSVIVG01001120001 Vitis vinifera
GSVIVG01005679001 Vitis vinifera
GSVIVG01005680001 Vitis vinifera
HanXRQChr06g0183721 Helianthus annuus
HanXRQChr10g0315971 Helianthus annuus
HanXRQChr16g0499301 Helianthus annuus
Haze_07081 Corylus avellana
Haze_12529 Corylus avellana
Haze_27293 Corylus avellana
Hma1.2p1_1333F.1_g276190 Hydrangea macrophylla
Hma1.2p1_3145F.1_g333110 Hydrangea macrophylla
HPP92_007021 Vanilla planifolia
HPP92_007037 Vanilla planifolia
HPP92_007038 Vanilla planifolia
HPP92_025305 Vanilla planifolia
HPP92_025306 Vanilla planifolia
Hund02518 Selenicereus undatus
Hund10018 Selenicereus undatus
Lalb_Chr08g0237621 Lupinus albus
Lalb_Chr12g0202621 Lupinus albus
Lalb_Chr13g0296901 Lupinus albus
Lj1g0025318 Lotus japonicus
Lj4g0028242 Lotus japonicus
Lj5A85T111 Lonicera japonica
Lj9C488T7 Lonicera japonica
Lsat_1_v5_gn_1_29981 Lactuca sativa
Lsat_1_v5_gn_4_85441 Lactuca sativa
Lsat_1_v5_gn_5_9501 Lactuca sativa
Manes.06G128200 Manihot esculenta
Manes.14G043300 Manihot esculenta
Mapoly0114s0016 Marchantia polymorpha
MBI11_g23190_MAGBIO Magnolia biondii
MCO11G448 Micromonas commoda
MD00G1076300 Malus domestica
MD08G1097600 Malus domestica
MD08G1097700 Malus domestica
MD13G1134200 Malus domestica
MD14G1144700 Malus domestica
MD16G1144800 Malus domestica
Medtr3g098430 Medicago truncatula
Medtr8g095680 Medicago truncatula
MELO3C002388.2 Cucumis melo
Migut.D01170 Erythranthe guttata
Migut.D01171 Erythranthe guttata
MSTRG.4648 Avicennia marina
MSTRG.9380 Avicennia marina
Nitab4.5_0002679g0010 Nicotiana tabacum
Nitab4.5_0002679g0060 Nicotiana tabacum
Nitab4.5_0005215g0010 Nicotiana tabacum
Nitab4.5_0005215g0020 Nicotiana tabacum
Nn4g22070 Nelumbo nucifera
Oeu012856.1 Olea europaea
Oeu060106.1 Olea europaea
Os04g0402100 Oryza sativa ssp. japonica
Peaxi162Scf00207g00250 Petunia axillaris
Peaxi162Scf00314g00733 Petunia axillaris
PGR102G0525 Punica granatum
PGR102G2598 Punica granatum
PGR119G1107 Punica granatum
PGSC0003DMG400014232 Solanum tuberosum
Phvul.002G280200 Phaseolus vulgaris
Phvul.002G280300 Phaseolus vulgaris
Potri.001G070600 Populus trichocarpa
Potri.012G111100 Populus trichocarpa
Potri.015G109200 Populus trichocarpa
Pp3c13_14270 Physcomitrium patens
Pp3c13_14280 Physcomitrium patens
Pp3c14_9220 Physcomitrium patens
Pp3c3_15970 Physcomitrium patens
Pp3c3_15980 Physcomitrium patens
Prupe.1G211400 Prunus persica
Prupe.5G139100 Prunus persica
Psat5g055640 Pisum sativum
Psat7g040040 Pisum sativum
PSO017G2485 Papaver somniferum
PSO017G5582 Papaver somniferum
PSO478G1323 Papaver somniferum
PSO478G1477 Papaver somniferum
QL03p048314 Quercus lobata
QL10p000208 Quercus lobata
RcHm_v2.0_Chr4g0428401 Rosa chinensis
RcHm_v2.0_Chr7g0188351 Rosa chinensis
Sabra12G0080900 Salix brachista
Sabra15G0131400 Salix brachista
SalBow1G8754 Salvia bowleyana
Sc20g0001590 Simmondsia chinensis
Sed0022453 Sechium edule
Sed0027075 Sechium edule
SEGI_21600 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15689 Striga asiatica
SGA_v2.0_scaffold74G24626 Striga asiatica
SHI10751 Sapria himalayana
Solyc03g118040.3 Solanum lycopersicum
Solyc06g068700.4 Solanum lycopersicum
Sopen03g036940 Solanum pennellii
Sopen06g025980 Solanum pennellii
Sp2g24990 Schrenkiella parvula
Sp6g35540 Schrenkiella parvula
TAR371G1022 Trochodendron aralioides
TAR622G0291 Trochodendron aralioides
TAR629G0240 Trochodendron aralioides
THA.LOC104801740 Tarenaya hassleriana
THA.LOC104811551 Tarenaya hassleriana
THA.LOC104818289 Tarenaya hassleriana
THA.LOC104825044 Tarenaya hassleriana
Thecc.03G142800 Theobroma cacao
Thhalv10013223m.g Eutrema salsugineum
TPR.G12957 Trifolium pratense
TPR.G16928 Trifolium pratense
TWI14G0053 Tripterygium wilfordii
TWI23G0842 Tripterygium wilfordii
TWI75G1448 Tripterygium wilfordii
unitig_736.g22832 Utricularia gibba
unitig_747.g21316 Utricularia gibba
unitig_899.g14824 Utricularia gibba
vmacro16768 Vaccinium macrocarpon
vmacro16772 Vaccinium macrocarpon
vmacro19102 Vaccinium macrocarpon
VMungo0251G0813 Vigna mungo
Zm00001eb084590 Zea mays
Zm00001eb086450 Zea mays
Zm00001eb421600 Zea mays

User provided reference genes

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