Gene: AT5G07340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G07340
  • Transcript Identifier AT5G07340.1
  • Gene Type Coding gene
  • Location Chr5 : 2317300-2319458 : positive

Gene Family Information

  • ID HOM05D002839
  • #Genes/#Species 244/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G07340.1
  • uniprot Q38798

Descriptions

  • Description Calreticulin family protein
  • Computational description Calreticulin family protein; FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: calnexin 1 (TAIR:AT5G61790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0065003
ISO
PLAZA Integrative Orthologyprotein-containing complex assembly Zm00001eb421600
GO:0006457
IBA
IEA
Gene Ontologyprotein folding1
GO:0006457
IEA
InterProprotein folding
GO:0030433
IBA
Gene Ontologyubiquitin-dependent ERAD pathway1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051082
IEA
Gene Ontologyunfolded protein binding
GO:0051082
IEA
InterProunfolded protein binding
GO:0005515
IEA
InterProprotein binding
GO:0005509
IBA
IEA
Gene Ontologycalcium ion binding1
GO:0005509
IEA
InterProcalcium ion binding
GO:0030246
IEA
GOA Databasecarbohydrate binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030176
ISO
PLAZA Integrative Orthologyintegral component of endoplasmic reticulum membrane Zm00001eb421600
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
HDA
Gene Ontologyendoplasmic reticulum2
GO:0005783
IEA
InterProendoplasmic reticulum
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005789
IBA
Gene Ontologyendoplasmic reticulum membrane1
GO:0000325
HDA
Gene Ontologyplant-type vacuole3
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009033 Calreticulin/calnexin, P domain superfamily
IPR001580 Calreticulin/calnexin
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Mapman id Description
19.1.1.1.1.1 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.CNX-CRT cycle.lectin chaperone (CNX)