Gene: Carub.0008s2248

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2248
  • Transcript Identifier Carub.0008s2248.1
  • Gene Type Coding gene
  • Location scaffold_8 : 11105800-11108104 : negative

Gene Family Information

  • ID HOM05D002839
  • #Genes/#Species 244/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2248.v1.1
  • pacid 39251016
  • synonym Carubv10026443m.g

Descriptions

  • Description K08054 - calnexin (CANX)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006457
IEA
InterProprotein folding
GO:0065003
ISO
PLAZA Integrative Orthologyprotein-containing complex assembly Zm00001eb421600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
InterProcalcium ion binding
GO:0005515
IEA
InterProprotein binding
GO:0051082
IEA
InterProunfolded protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
InterProendoplasmic reticulum
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G61790
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G61790
GO:0043231
ISO
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT5G61790
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G61790
GO:0030176
ISO
PLAZA Integrative Orthologyintegral component of endoplasmic reticulum membrane Zm00001eb421600
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT5G61790
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G61790
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G61790
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G61790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009033 Calreticulin/calnexin, P domain superfamily
IPR001580 Calreticulin/calnexin
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Mapman id Description
19.1.1.1.1.1 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.CNX-CRT cycle.lectin chaperone (CNX)