Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02230 Brassica napus
A03p37620 Brassica napus
Aa31LG4G12730 Aethionema arabicum
Aa31sc601G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1874 Anthoceros agrestis
Actinidia01523 Actinidia chinensis
Actinidia01694 Actinidia chinensis
Actinidia19976 Actinidia chinensis
Ah.12g060100 Amaranthus hybridus
AL3G24060 Arabidopsis lyrata
AL4G25780 Arabidopsis lyrata
AL4G36140 Arabidopsis lyrata
AL6G24500 Arabidopsis lyrata
Aqoxy1G01775 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.XZG5F2 Arachis hypogaea
AT2G38830 Arabidopsis thaliana
AT3G12400 Arabidopsis thaliana
AT5G13860 Arabidopsis thaliana
ATR0665G305 Amborella trichopoda
ATR0724G051 Amborella trichopoda
ATR0724G092 Amborella trichopoda
Atru.chr12.1228 Acer truncatum
Atru.chr5.1551 Acer truncatum
AUR62011953 Chenopodium quinoa
AUR62032266 Chenopodium quinoa
AUR62037784 Chenopodium quinoa
AUR62042227 Chenopodium quinoa
BcaB04g18682 Brassica carinata
BcaB04g21080 Brassica carinata
BcaB06g25536 Brassica carinata
BcaC01g04050 Brassica carinata
BcaC02g07442 Brassica carinata
BcaC05g29264 Brassica carinata
BcaNung04179 Brassica carinata
BolC2t06593H Brassica oleracea
BolC3t16838H Brassica oleracea
BolC4t28192H Brassica oleracea
BolC5t34209H Brassica oleracea
BraA02t05195Z Brassica rapa
BraA03t12916Z Brassica rapa
BraA04t18428Z Brassica rapa
C02p06470 Brassica napus
C03p45610 Brassica napus
C04p66910 Brassica napus
C05p55430 Brassica napus
CAN.G1099.6 Capsicum annuum
CAN.G974.4 Capsicum annuum
CANSAT25G1921 Cannabis sativa
CARHR086930 Cardamine hirsuta
CARHR133560 Cardamine hirsuta
CARHR199570 Cardamine hirsuta
CARHR292910 Cardamine hirsuta
Carub.0003s1176 Capsella rubella
Carub.0004s2086 Capsella rubella
Carub.0006s1205 Capsella rubella
Ca_19009_v3 Cicer arietinum L.
CBR_g25956 Chara braunii
CBR_g70686 Chara braunii
CBR_g8221 Chara braunii
Cc11_g05290 Coffea canephora
CDE02G2097 Ceratophyllum demersum
CDE06G1907 Ceratophyllum demersum
CDE08G0623 Ceratophyllum demersum
CDE08G1174 Ceratophyllum demersum
Cfa026261 Carpinus fangiana
Ciclev10001331m.g Citrus clementina
Ciclev10021040m.g Citrus clementina
CiPaw.13G017600 Carya illinoinensis
CiPaw.14G011100 Carya illinoinensis
ClCG11G013010 Citrullus lanatus
COL.COLO4_03716 Corchorus olitorius
COL.COLO4_05752 Corchorus olitorius
Cpa.g.sc33.161 Carica papaya
Cpa.g.sc52.81 Carica papaya
Cpa.g.sc73.6 Carica papaya
Cre07.g351050 Chlamydomonas reinhardtii
CsaV3_5G029500 Cucumis sativus L.
CSS0008682 Camellia sinensis var. sinensis
CSS0040049 Camellia sinensis var. sinensis
DCAR_001965 Daucus carota
Dinv31525 Davidia involucrata
Dinv31988 Davidia involucrata
Duzib106G0702 Durio zibethinus
Duzib114G0429 Durio zibethinus
Duzib128G1841 Durio zibethinus
Duzib138G0858 Durio zibethinus
Duzib211G0234 Durio zibethinus
ECA236G0686 Erigeron canadensis
ECA247G2719 Erigeron canadensis
ECA248G1428 Erigeron canadensis
EL10Ac2g03190 Beta vulgaris
EL10Ac5g10464 Beta vulgaris
Eucgr.B01481 Eucalyptus grandis
Eucgr.B01483 Eucalyptus grandis
FAN12G0853 Fragaria x ananassa
FAN12G2978 Fragaria x ananassa
FAN13G2664 Fragaria x ananassa
FAN17G1208 Fragaria x ananassa
FAN20G0724 Fragaria x ananassa
FAN22G1893 Fragaria x ananassa
FvH4_4g12000 Fragaria vesca
Glyma.11G099100 Glycine max
Glyma.12G025000 Glycine max
Glyma.12G025300 Glycine max
Gohir.A06G173500 Gossypium hirsutum
Gohir.A07G208400 Gossypium hirsutum
Gohir.A10G191000 Gossypium hirsutum
Gohir.D06G183500 Gossypium hirsutum
Gohir.D07G214300 Gossypium hirsutum
Gohir.D10G198700 Gossypium hirsutum
Gorai.001G242300 Gossypium raimondii
Gorai.010G214500 Gossypium raimondii
Gorai.011G222600 Gossypium raimondii
GSVIVG01018153001 Vitis vinifera
HanXRQChr01g0028021 Helianthus annuus
HanXRQChr10g0281491 Helianthus annuus
HanXRQChr12g0383231 Helianthus annuus
Haze_02964 Corylus avellana
Hma1.2p1_0233F.1_g098250 Hydrangea macrophylla
Hma1.2p1_0760F.1_g214210 Hydrangea macrophylla
HPP92_022615 Vanilla planifolia
HPP92_022617 Vanilla planifolia
HPP92_022660 Vanilla planifolia
HPP92_022661 Vanilla planifolia
Lalb_Chr03g0024731 Lupinus albus
Lalb_Chr19g0139471 Lupinus albus
Lj2P1161T30 Lonicera japonica
Lj3g0010233 Lotus japonicus
Lj9C650T3 Lonicera japonica
Lsat_1_v5_gn_7_12560 Lactuca sativa
Lsat_1_v5_gn_9_8120 Lactuca sativa
Manes.04G154600 Manihot esculenta
Manes.05G083350 Manihot esculenta
Manes.05G083582 Manihot esculenta
Manes.11G009300 Manihot esculenta
Mapoly0030s0083 Marchantia polymorpha
Mapoly0055s0078 Marchantia polymorpha
MBI03_g24839_MAGBIO Magnolia biondii
MBI04_g19772_MAGBIO Magnolia biondii
MCO09G289 Micromonas commoda
MD00G1152100 Malus domestica
MD02G1270800 Malus domestica
Medtr4g075250 Medicago truncatula
Medtr5g075880 Medicago truncatula
MELO3C011795.2 Cucumis melo
Migut.D00343 Erythranthe guttata
Migut.F00759 Erythranthe guttata
MSTRG.18279 Avicennia marina
MSTRG.8266 Avicennia marina
Nitab4.5_0000187g0090 Nicotiana tabacum
Nitab4.5_0000381g0320 Nicotiana tabacum
Nitab4.5_0001969g0050 Nicotiana tabacum
Nitab4.5_0003446g0030 Nicotiana tabacum
Nitab4.5_0004567g0050 Nicotiana tabacum
Nitab4.5_0005447g0040 Nicotiana tabacum
Nn1g02518 Nelumbo nucifera
Nn1g02520 Nelumbo nucifera
Nn1g08685 Nelumbo nucifera
Nn2g14396 Nelumbo nucifera
Nn3g19474 Nelumbo nucifera
Nn3g19475 Nelumbo nucifera
Oeu009488.1 Olea europaea
Oeu011516.1 Olea europaea
Oeu039033.2 Olea europaea
Os02g0833300 Oryza sativa ssp. japonica
Peaxi162Scf00068g01814 Petunia axillaris
Peaxi162Scf00146g00068 Petunia axillaris
PGR031G1101 Punica granatum
PGR044G1938 Punica granatum
PGSC0003DMG400002673 Solanum tuberosum
PGSC0003DMG400008386 Solanum tuberosum
PGSC0003DMG400019336 Solanum tuberosum
Phvul.011G027400 Phaseolus vulgaris
Potri.001G034200 Populus trichocarpa
Potri.002G046200 Populus trichocarpa
Potri.003G191100 Populus trichocarpa
Pp3c16_2240 Physcomitrium patens
Pp3c27_3040 Physcomitrium patens
PRCOL_00004265 Prasinoderma coloniale
Prupe.2G048300 Prunus persica
Prupe.2G048600 Prunus persica
Prupe.8G144500 Prunus persica
Psat7g177600 Pisum sativum
PSO170G0785 Papaver somniferum
PSO170G1148 Papaver somniferum
PSO210G7409 Papaver somniferum
PSO210G7443 Papaver somniferum
PSO339G5002 Papaver somniferum
PSO461G0025 Papaver somniferum
PSO782G2493 Papaver somniferum
PSO801G0033 Papaver somniferum
PSO832G1425 Papaver somniferum
QL04p022083 Quercus lobata
QL12p042559 Quercus lobata
RcHm_v2.0_Chr4g0409601 Rosa chinensis
Rhsim01G0122600 Rhododendron simsii
Rhsim07G0071800 Rhododendron simsii
Rhsim13G0030300 Rhododendron simsii
Sabra01G0024300 Salix brachista
Sabra02G0037100 Salix brachista
Sabra03G0140800 Salix brachista
SalBow5G0637 Salvia bowleyana
SalBow6G4288 Salvia bowleyana
Sc05g0001080 Simmondsia chinensis
Sc20g0001750 Simmondsia chinensis
Sed0003493 Sechium edule
Sed0015789 Sechium edule
SGA_v2.0_scaffold221G42693 Striga asiatica
SGA_v2.0_scaffold2G01033 Striga asiatica
SGA_v2.0_scaffold80G25963 Striga asiatica
SMO011G0037 Selaginella moellendorffii
Solyc09g009270.2 Solanum lycopersicum
Solyc09g065770.1 Solanum lycopersicum
Solyc10g085590.1 Solanum lycopersicum
Sopen09g004000 Solanum pennellii
Sopen09g027530 Solanum pennellii
Sopen10g035000 Solanum pennellii
Sp3g10590 Schrenkiella parvula
Sp4g21220 Schrenkiella parvula
Sp6g30140 Schrenkiella parvula
TAR362G0691 Trochodendron aralioides
TAR362G0971 Trochodendron aralioides
TAR362G1195 Trochodendron aralioides
TAR374G0026 Trochodendron aralioides
TAR374G0392 Trochodendron aralioides
TAR629G1403 Trochodendron aralioides
THA.LOC104804689 Tarenaya hassleriana
THA.LOC104809910 Tarenaya hassleriana
THA.LOC104826744 Tarenaya hassleriana
Thecc.01G268900 Theobroma cacao
Thecc.10G136700 Theobroma cacao
Thhalv10000683m.g Eutrema salsugineum
Thhalv10013854m.g Eutrema salsugineum
Thhalv10016907m.g Eutrema salsugineum
Thhalv10022018m.g Eutrema salsugineum
TPR.G17156 Trifolium pratense
TWI12G0970 Tripterygium wilfordii
TWI38G1269 Tripterygium wilfordii
TWI63G1731 Tripterygium wilfordii
unitig_0.g1017 Utricularia gibba
vmacro13783 Vaccinium macrocarpon
vmacro20849 Vaccinium macrocarpon
VMungo1127G1778 Vigna mungo
Zm00001eb259630 Zea mays
Zm00001eb409970 Zea mays

User provided reference genes

Program Settings