Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07050 Brassica napus
A09p46610 Brassica napus
Aa31LG10G520 Aethionema arabicum
Aa31LG2G19130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.801 Anthoceros agrestis
Actinidia03329 Actinidia chinensis
Actinidia25730 Actinidia chinensis
Ah.13g073200 Amaranthus hybridus
AL1G37840 Arabidopsis lyrata
AL5G34940 Arabidopsis lyrata
AL7G11530 Arabidopsis lyrata
AL7G20890 Arabidopsis lyrata
Aqoxy4G02333 Aquilegia oxysepala
Aqoxy7G02657 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.478ZG4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4T50W5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B49C2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EI37M4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FW1LZ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G963NV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P264ZS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9PNZL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V530VD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VR4H6N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WR8BUK Arachis hypogaea
AT4G26870 Arabidopsis thaliana
AT4G31180 Arabidopsis thaliana
ATR0463G001 Amborella trichopoda
ATR0618G057 Amborella trichopoda
ATR0626G153 Amborella trichopoda
ATR0665G037 Amborella trichopoda
ATR0665G581 Amborella trichopoda
ATR0807G126 Amborella trichopoda
Atru.chr7.2704 Acer truncatum
AUR62002480 Chenopodium quinoa
AUR62023712 Chenopodium quinoa
AUR62023713 Chenopodium quinoa
BcaB01g00260 Brassica carinata
BcaC07g39721 Brassica carinata
BcaC09g51901 Brassica carinata
BcaNung01331 Brassica carinata
BcaNung01536 Brassica carinata
BcaNung01537 Brassica carinata
BcaNung07161 Brassica carinata
BolC1t00766H Brassica oleracea
BolC1t01007H Brassica oleracea
BolC5t31108H Brassica oleracea
BolC5t31115H Brassica oleracea
BolC8t50495H Brassica oleracea
BolC8t50496H Brassica oleracea
BraA01t00657Z Brassica rapa
BraA03t15099Z Brassica rapa
C01p07800 Brassica napus
C05p23890 Brassica napus
C08p28930 Brassica napus
CAN.G190.11 Capsicum annuum
CAN.G1921.4 Capsicum annuum
CAN.G786.4 Capsicum annuum
CAN.G786.5 Capsicum annuum
CAN.G786.6 Capsicum annuum
CANSAT78G1421 Cannabis sativa
CARHR111480 Cardamine hirsuta
CARHR112510 Cardamine hirsuta
CARHR112520 Cardamine hirsuta
CARHR239090 Cardamine hirsuta
Carub.0005s2052 Capsella rubella
Carub.0007s0935 Capsella rubella
Carub.0007s0994 Capsella rubella
Ca_13063_v3 Cicer arietinum L.
Ca_25166_v3 Cicer arietinum L.
Ca_26400_v3 Cicer arietinum L.
CBR_g19622 Chara braunii
Cc11_g01270 Coffea canephora
CDE02G0432 Ceratophyllum demersum
CDE09G0887 Ceratophyllum demersum
Cfa013226 Carpinus fangiana
Cfa024060 Carpinus fangiana
Ciclev10004669m.g Citrus clementina
CiPaw.07G216300 Carya illinoinensis
ClCG05G017340 Citrullus lanatus
COL.COLO4_18646 Corchorus olitorius
COL.COLO4_19460 Corchorus olitorius
COL.COLO4_25680 Corchorus olitorius
COL.COLO4_27085 Corchorus olitorius
COL.COLO4_28883 Corchorus olitorius
Cpa.g.sc37.195 Carica papaya
Cre06.g279150 Chlamydomonas reinhardtii
CsaV3_3G046850 Cucumis sativus L.
CSS0008198 Camellia sinensis var. sinensis
CSS0028741 Camellia sinensis var. sinensis
CSS0040336 Camellia sinensis var. sinensis
DCAR_027376 Daucus carota
Dinv09454 Davidia involucrata
Duzib168G0624 Durio zibethinus
ECA247G1103 Erigeron canadensis
ECA248G0538 Erigeron canadensis
EL10Ac3g06163 Beta vulgaris
Eucgr.C00281 Eucalyptus grandis
Eucgr.C03981 Eucalyptus grandis
Eucgr.K02027 Eucalyptus grandis
FAN20G0887 Fragaria x ananassa
FAN20G1456 Fragaria x ananassa
FAN24G1450 Fragaria x ananassa
FAN24G1470 Fragaria x ananassa
FAN24G3093 Fragaria x ananassa
FAN27G0558 Fragaria x ananassa
FAN27G1936 Fragaria x ananassa
FAN27G2211 Fragaria x ananassa
FvH4_2g15870 Fragaria vesca
FvH4_2g15910 Fragaria vesca
FvH4_2g30550 Fragaria vesca
Glyma.14G101500 Glycine max
Glyma.17G223600 Glycine max
Gohir.A07G001200 Gossypium hirsutum
Gohir.D07G001600 Gossypium hirsutum
Gorai.001G001300 Gossypium raimondii
GSVIVG01035583001 Vitis vinifera
HanXRQChr05g0133591 Helianthus annuus
HanXRQChr10g0292711 Helianthus annuus
HanXRQChr11g0342691 Helianthus annuus
Haze_21649 Corylus avellana
Haze_27085 Corylus avellana
Hma1.2p1_1470F.1_g285580 Hydrangea macrophylla
HPP92_010332 Vanilla planifolia
HPP92_010422 Vanilla planifolia
HPP92_010423 Vanilla planifolia
Hund22584 Selenicereus undatus
Lalb_Chr04g0248401 Lupinus albus
Lalb_Chr10g0107001 Lupinus albus
Lj5g0001123 Lotus japonicus
Lj6A614G27 Lonicera japonica
Lj6A614T28 Lonicera japonica
Lsat_1_v5_gn_1_72341 Lactuca sativa
Lsat_1_v5_gn_5_33240 Lactuca sativa
Manes.02G204300 Manihot esculenta
Manes.18G112500 Manihot esculenta
Mapoly0132s0010 Marchantia polymorpha
MBI13_g33568_MAGBIO Magnolia biondii
MBI14_g30657_MAGBIO Magnolia biondii
MCO02G405 Micromonas commoda
MD08G1134400 Malus domestica
MD12G1153800 Malus domestica
MD14G1143300 Malus domestica
MD15G1113400 Malus domestica
Medtr1g014140 Medicago truncatula
Medtr5g028360 Medicago truncatula
MELO3C003651.2 Cucumis melo
Migut.E00796 Erythranthe guttata
Migut.E01411 Erythranthe guttata
Migut.E01595 Erythranthe guttata
MSTRG.13933 Avicennia marina
Nitab4.5_0000080g0320 Nicotiana tabacum
Nitab4.5_0001449g0030 Nicotiana tabacum
Nn4g24942 Nelumbo nucifera
Nn8g41171 Nelumbo nucifera
Nn8g41173 Nelumbo nucifera
Oeu012918.1 Olea europaea
Oeu014115.1 Olea europaea
Oeu019276.1 Olea europaea
Oeu039634.1 Olea europaea
Os02g0139600 Oryza sativa ssp. japonica
Os02g0686400 Oryza sativa ssp. japonica
Peaxi162Scf00619g00214 Petunia axillaris
Peaxi162Scf00858g00018 Petunia axillaris
Peaxi162Scf02754g00004 Petunia axillaris
PGR044G1761 Punica granatum
Phvul.001G030000 Phaseolus vulgaris
Potri.006G085400 Populus trichocarpa
Pp3c21_10900 Physcomitrium patens
PRCOL_00003891 Prasinoderma coloniale
Prupe.1G463800 Prunus persica
Prupe.4G141600 Prunus persica
Prupe.8G055000 Prunus persica
Psat6g026040 Pisum sativum
Psat7g219120 Pisum sativum
PSO017G0307 Papaver somniferum
PSO170G4826 Papaver somniferum
PSO478G0309 Papaver somniferum
PSO675G3748 Papaver somniferum
PSO832G0016 Papaver somniferum
PSO832G1322 Papaver somniferum
PSO832G2134 Papaver somniferum
PSO832G2265 Papaver somniferum
PSO832G3535 Papaver somniferum
QL12p029110 Quercus lobata
QL12p029213 Quercus lobata
QL12p029302 Quercus lobata
RcHm_v2.0_Chr5g0032141 Rosa chinensis
RcHm_v2.0_Chr5g0032161 Rosa chinensis
RcHm_v2.0_Chr6g0278871 Rosa chinensis
RcHm_v2.0_Chr6g0312341 Rosa chinensis
RcHm_v2.0_Chr6g0312361 Rosa chinensis
RcHm_v2.0_Chr6g0312531 Rosa chinensis
Rhsim03G0118000 Rhododendron simsii
Rhsim07G0112700 Rhododendron simsii
Rhsim07G0113200 Rhododendron simsii
Rhsim07G0113300 Rhododendron simsii
Rhsim07G0113700 Rhododendron simsii
Rhsim07G0171600 Rhododendron simsii
Rhsim07G0171800 Rhododendron simsii
Rhsim07G0171900 Rhododendron simsii
Rhsim09G0058200 Rhododendron simsii
RhsimUnG0102000 Rhododendron simsii
Sabra06G0064900 Salix brachista
SalBow1G0367 Salvia bowleyana
SalBow1G1421 Salvia bowleyana
SalBow1G4615 Salvia bowleyana
SalBow8G0076 Salvia bowleyana
Sc19g0002420 Simmondsia chinensis
Sed0013692 Sechium edule
Sed0018818 Sechium edule
SEGI_02968 Sequoiadendron giganteum
SEGI_10721 Sequoiadendron giganteum
SEGI_14757 Sequoiadendron giganteum
SGA_v2.0_scaffold17G08116 Striga asiatica
SGA_v2.0_scaffold17G08122 Striga asiatica
SGA_v2.0_scaffold20G09307 Striga asiatica
SGA_v2.0_scaffold51G18727 Striga asiatica
SGA_v2.0_scaffold63G21766 Striga asiatica
SGA_v2.0_scaffold63G21774 Striga asiatica
SMO119G0059 Selaginella moellendorffii
SMO351G0410 Selaginella moellendorffii
Solyc05g056250.3 Solanum lycopersicum
Sopen05g034640 Solanum pennellii
Sp7g29070 Schrenkiella parvula
TAR383G0197 Trochodendron aralioides
TAR626G1626 Trochodendron aralioides
THA.LOC104803886 Tarenaya hassleriana
Thecc.02G023900 Theobroma cacao
Thecc.09G000700 Theobroma cacao
Thhalv10015942m.g Eutrema salsugineum
Thhalv10023019m.g Eutrema salsugineum
Thhalv10023162m.g Eutrema salsugineum
Thhalv10024945m.g Eutrema salsugineum
TPR.G15250 Trifolium pratense
TPR.G30251 Trifolium pratense
TPR.G3453 Trifolium pratense
TPR.G34638 Trifolium pratense
TPR.G38912 Trifolium pratense
TWI34G0804 Tripterygium wilfordii
TWI63G0346 Tripterygium wilfordii
unitig_0.g2193 Utricularia gibba
unitig_747.g21377 Utricularia gibba
vmacro05094 Vaccinium macrocarpon
vmacro05095 Vaccinium macrocarpon
VMungo0647G0806 Vigna mungo
Zm00001eb231430 Zea mays
Zm00001eb338990 Zea mays

User provided reference genes

Program Settings