Gene: AT4G31180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G31180
  • Transcript Identifier AT4G31180.1
  • Gene Type Coding gene
  • Location Chr4 : 15156696-15159362 : positive

Gene Family Information

  • ID HOM05D002781
  • #Genes/#Species 248/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G31180.1
  • Alias IBI1,impaired in BABA-induced disease immunity 1
  • uniprot Q9M084

Descriptions

  • Description Class II aminoacyl-tRNA and biotin synthetases superfamily protein
  • Computational description Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aspartate-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion, aspartyl-tRNA aminoacylation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G26870.1); Has 27000 Blast hits to 21362 proteins in 2984 species: Archae - 448; Bacteria - 18821; Metazoa - 751; Fungi - 935; Plants - 402; Viruses - 0; Other Eukaryotes - 5643 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006422
IEA
GOA Databaseaspartyl-tRNA aminoacylation
GO:0006422
IBA
Gene Ontologyaspartyl-tRNA aminoacylation1
GO:0006422
IEA
InterProaspartyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0050832
IMP
Gene Ontologydefense response to fungus2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0004815
IEA
GOA Databaseaspartate-tRNA ligase activity
GO:0004815
IDA
IBA
Gene Ontologyaspartate-tRNA ligase activity1 2
GO:0004815
IEA
InterProaspartate-tRNA ligase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IBA
Gene OntologyRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
IDA
Gene Ontologyendoplasmic reticulum2
GO:0005829
IEA
GOA Databasecytosol
GO:0005829
IDA
IBA
Gene Ontologycytosol1 2
GO:0017101
IBA
Gene Ontologyaminoacyl-tRNA synthetase multienzyme complex1
GO:0005886
HDA
Gene Ontologyplasma membrane3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004523 Aspartate-tRNA synthetase, type 2
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
17.2.4 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase