Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p49930 Brassica napus
Aa31LG10G11900 Aethionema arabicum
Aa31LG10G12290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2134 Anthoceros agrestis
Actinidia17690 Actinidia chinensis
Actinidia38157 Actinidia chinensis
Ah.00g000670 Amaranthus hybridus
Ah.04g151050 Amaranthus hybridus
AL5G38450 Arabidopsis lyrata
Aqoxy3G03846 Aquilegia oxysepala
Aqoxy6G02143 Aquilegia oxysepala
Aqoxy6G02147 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00JXB8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9G542N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EUNR7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FV4B32 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KMZL4Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8MLZ0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PL1MYW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QALZ28 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7ZPK3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZN92QR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZT4TH6 Arachis hypogaea
AT3G57000 Arabidopsis thaliana
ATR1098G114 Amborella trichopoda
Atru.chr6.2789 Acer truncatum
AUR62003734 Chenopodium quinoa
AUR62014167 Chenopodium quinoa
AUR62016563 Chenopodium quinoa
AUR62018407 Chenopodium quinoa
AUR62020899 Chenopodium quinoa
AUR62020900 Chenopodium quinoa
AUR62021036 Chenopodium quinoa
AUR62022312 Chenopodium quinoa
AUR62022313 Chenopodium quinoa
AUR62022315 Chenopodium quinoa
AUR62023903 Chenopodium quinoa
AUR62026605 Chenopodium quinoa
BcaB02g07626 Brassica carinata
BcaC03g13660 Brassica carinata
BcaC07g40020 Brassica carinata
BcaC07g40087 Brassica carinata
BolC8t50847H Brassica oleracea
BraA09t40444Z Brassica rapa
C08p32330 Brassica napus
CAN.G1289.7 Capsicum annuum
CAN.G506.9 Capsicum annuum
CANSAT54G0215 Cannabis sativa
CANSAT64G0594 Cannabis sativa
CANSAT80G1025 Cannabis sativa
CARHR155690 Cardamine hirsuta
CARHR167150 Cardamine hirsuta
Carub.0005s2374 Capsella rubella
Ca_04642_v3 Cicer arietinum L.
Ca_12664_v3 Cicer arietinum L.
Ca_25994_v3 Cicer arietinum L.
CBR_g21861 Chara braunii
Cc05_g02110 Coffea canephora
Cc05_g02270 Coffea canephora
Cc05_g02860 Coffea canephora
Cc05_g02870 Coffea canephora
Cc06_g19070 Coffea canephora
CDE04G2576 Ceratophyllum demersum
CDE06G1766 Ceratophyllum demersum
Cfa020075 Carpinus fangiana
Ciclev10005540m.g Citrus clementina
CiPaw.09G046900 Carya illinoinensis
ClCG07G006890 Citrullus lanatus
ClCG07G006900 Citrullus lanatus
ClCG10G016150 Citrullus lanatus
COL.COLO4_35076 Corchorus olitorius
Cpa.g.sc1212.2 Carica papaya
Cpa.g.sc5.184 Carica papaya
Cre01.g009950 Chlamydomonas reinhardtii
CsaV3_3G040270 Cucumis sativus L.
CsaV3_7G022030 Cucumis sativus L.
CSS0007850 Camellia sinensis var. sinensis
CSS0008082 Camellia sinensis var. sinensis
CSS0013149 Camellia sinensis var. sinensis
CSS0033813 Camellia sinensis var. sinensis
CSS0045331 Camellia sinensis var. sinensis
DCAR_013140 Daucus carota
DCAR_015349 Daucus carota
Dinv09476 Davidia involucrata
Dinv34371 Davidia involucrata
Duzib093G0615 Durio zibethinus
Duzib093G1218 Durio zibethinus
Duzib093G1791 Durio zibethinus
Duzib128G1110 Durio zibethinus
ECA246G4177 Erigeron canadensis
EL10Ac4g08988 Beta vulgaris
EL10Ac5g11207 Beta vulgaris
EL10Ac5g11210 Beta vulgaris
EL10As10g23955 Beta vulgaris
EL10As8g23871 Beta vulgaris
Eucgr.A00197 Eucalyptus grandis
Eucgr.A02611 Eucalyptus grandis
FAN03G1329 Fragaria x ananassa
FAN06G2456 Fragaria x ananassa
FAN10G3784 Fragaria x ananassa
FvH4_7g03130 Fragaria vesca
Glyma.09G120101 Glycine max
Glyma.11G099000 Glycine max
Glyma.12G025100 Glycine max
Glyma.17G046050 Glycine max
Glyma.17G046100 Glycine max
Gohir.A12G087250 Gossypium hirsutum
Gohir.A12G115000 Gossypium hirsutum
Gohir.D12G108700 Gossypium hirsutum
Gohir.D12G118500 Gossypium hirsutum
Gorai.008G095800 Gossypium raimondii
Gorai.008G117700 Gossypium raimondii
Gorai.008G128200 Gossypium raimondii
Gorai.008G249100 Gossypium raimondii
GSVIVG01027320001 Vitis vinifera
GSVIVG01033616001 Vitis vinifera
GSVIVG01034618001 Vitis vinifera
HanXRQChr03g0084251 Helianthus annuus
HanXRQChr13g0414121 Helianthus annuus
Haze_05926 Corylus avellana
Hma1.2p1_0004F.1_g003775 Hydrangea macrophylla
Hma1.2p1_0065F.1_g035090 Hydrangea macrophylla
Hma1.2p1_2276F.1_g318640 Hydrangea macrophylla
HPP92_003789 Vanilla planifolia
Hund00512 Selenicereus undatus
Hund00513 Selenicereus undatus
Hund19102 Selenicereus undatus
Lalb_Chr02g0156541 Lupinus albus
Lalb_Chr02g0156551 Lupinus albus
Lj1A1095T29 Lonicera japonica
Lj1A1097T43 Lonicera japonica
Lj1A554T15 Lonicera japonica
Lj1A554T16 Lonicera japonica
Lj1g0008464 Lotus japonicus
Lj6g0004170 Lotus japonicus
Lj7A424G25 Lonicera japonica
Lsat_1_v5_gn_6_79381 Lactuca sativa
Manes.08G059000 Manihot esculenta
Mapoly0014s0080 Marchantia polymorpha
MBI10_g18308_MAGBIO Magnolia biondii
MCO01G479 Micromonas commoda
MD02G1295000 Malus domestica
MD02G1295100 Malus domestica
MD03G1003800 Malus domestica
MD03G1003900 Malus domestica
MD07G1030500 Malus domestica
MD08G1038500 Malus domestica
MD14G1085000 Malus domestica
Medtr1g112880 Medicago truncatula
Medtr3g096190 Medicago truncatula
Medtr4g032390 Medicago truncatula
Medtr5g464770 Medicago truncatula
MELO3C009764.2 Cucumis melo
MELO3C020061.2 Cucumis melo
MELO3C032272.2 Cucumis melo
MELO3C032273.2 Cucumis melo
Migut.D02225 Erythranthe guttata
MSTRG.23859 Avicennia marina
Nitab4.5_0000125g0340 Nicotiana tabacum
Nitab4.5_0001194g0060 Nicotiana tabacum
Nitab4.5_0005444g0010 Nicotiana tabacum
Nitab4.5_0005720g0010 Nicotiana tabacum
Nitab4.5_0006579g0030 Nicotiana tabacum
Nitab4.5_0007571g0010 Nicotiana tabacum
Nitab4.5_0007985g0020 Nicotiana tabacum
Nn3g17659 Nelumbo nucifera
Oeu029503.1 Olea europaea
Oeu059335.1 Olea europaea
Os02g0290400 Oryza sativa ssp. japonica
Peaxi162Scf00013g01020 Petunia axillaris
Peaxi162Scf00105g01445 Petunia axillaris
PGR142G2871 Punica granatum
PGSC0003DMG400028775 Solanum tuberosum
PGSC0003DMG400033615 Solanum tuberosum
Phvul.011G027300 Phaseolus vulgaris
Potri.006G040600 Populus trichocarpa
Potri.016G037500 Populus trichocarpa
Pp3c24_11670 Physcomitrium patens
PRCOL_00005011 Prasinoderma coloniale
Prupe.1G567900 Prunus persica
Prupe.1G568800 Prunus persica
Prupe.1G568900 Prunus persica
Prupe.1G569000 Prunus persica
Prupe.1G569100 Prunus persica
Prupe.1G569200 Prunus persica
Prupe.4G213100 Prunus persica
Prupe.7G040700 Prunus persica
Psat7g226520 Pisum sativum
PSO017G6910 Papaver somniferum
PSO478G3377 Papaver somniferum
QL05p018587 Quercus lobata
QL07p009818 Quercus lobata
QL08p033654 Quercus lobata
QL93p1866_0204 Quercus lobata
RcHm_v2.0_Chr1g0317791 Rosa chinensis
RcHm_v2.0_Chr1g0324931 Rosa chinensis
RcHm_v2.0_Chr2g0125441 Rosa chinensis
RcHm_v2.0_Chr4g0421871 Rosa chinensis
Rhsim02G0223300 Rhododendron simsii
Rhsim04G0110900 Rhododendron simsii
Rhsim09G0083500 Rhododendron simsii
Rhsim09G0083600 Rhododendron simsii
Rhsim09G0125200 Rhododendron simsii
Sabra16G0022400 Salix brachista
Sabra16G0029700 Salix brachista
Sabra16G0039200 Salix brachista
Sabra16G0039500 Salix brachista
Sabra16G0039700 Salix brachista
Sabra16G0044400 Salix brachista
SalBow5G1745 Salvia bowleyana
SalBow8G2070 Salvia bowleyana
SalBow8G4805 Salvia bowleyana
Sc13g0001210 Simmondsia chinensis
Sc13g0001220 Simmondsia chinensis
Sc19g0008230 Simmondsia chinensis
Sed0003772 Sechium edule
Sed0020900 Sechium edule
Sed0027850 Sechium edule
Sed0027858 Sechium edule
SGA_v2.0_scaffold273G46400 Striga asiatica
SGA_v2.0_scaffold94G28531 Striga asiatica
SHI08202 Sapria himalayana
SHI25705 Sapria himalayana
SMO347G0033 Selaginella moellendorffii
Solyc06g069135.1 Solanum lycopersicum
Solyc08g067750.1 Solanum lycopersicum
Solyc12g017630.2 Solanum lycopersicum
Solyc12g017675.2 Solanum lycopersicum
Sopen08g021640 Solanum pennellii
Sopen12g008390 Solanum pennellii
Sopen12g008460 Solanum pennellii
Sp5g05580 Schrenkiella parvula
TAR622G0121 Trochodendron aralioides
THA.LOC104803263 Tarenaya hassleriana
THA.LOC104824404 Tarenaya hassleriana
Thecc.03G273900 Theobroma cacao
Thecc.05G137600 Theobroma cacao
Thecc.05G138200 Theobroma cacao
Thecc.07G138100 Theobroma cacao
Thecc.07G141100 Theobroma cacao
Thecc.07G141200 Theobroma cacao
Thecc.07G141400 Theobroma cacao
Thhalv10006512m.g Eutrema salsugineum
TPR.G20380 Trifolium pratense
TPR.G22980 Trifolium pratense
TPR.G40824 Trifolium pratense
TPR.G8394 Trifolium pratense
TWI53G0099 Tripterygium wilfordii
TWI77G0285 Tripterygium wilfordii
unitig_37.g12701 Utricularia gibba
vmacro09026 Vaccinium macrocarpon
VMungo1127G1646 Vigna mungo
Zm00001eb249350 Zea mays

User provided reference genes

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