Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21500 Brassica napus
A02p20940 Brassica napus
A03p54460 Brassica napus
A04p21730 Brassica napus
A08p12450 Brassica napus
A08p23110 Brassica napus
A09p58030 Brassica napus
A09p66440 Brassica napus
A10p13290 Brassica napus
Aa31LG10G6050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.407 Anthoceros agrestis
Actinidia03339 Actinidia chinensis
Actinidia03340 Actinidia chinensis
Actinidia25741 Actinidia chinensis
Ah.10g033820 Amaranthus hybridus
AL5G21150 Arabidopsis lyrata
AL7G39040 Arabidopsis lyrata
Aqoxy4G00376 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NA6C8E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YWBJ1A Arachis hypogaea
AT3G42850 Arabidopsis thaliana
AT4G16130 Arabidopsis thaliana
ATR0626G149 Amborella trichopoda
Atru.chr7.2686 Acer truncatum
Atru.chr8.1462 Acer truncatum
AUR62020642 Chenopodium quinoa
AUR62038736 Chenopodium quinoa
BcaB04g18358 Brassica carinata
BcaB04g18359 Brassica carinata
BcaB08g35974 Brassica carinata
BcaC04g20159 Brassica carinata
BcaC05g26867 Brassica carinata
BcaC09g50300 Brassica carinata
BcaNung00226 Brassica carinata
BolC1t02628H Brassica oleracea
BolC5t31465H Brassica oleracea
BolC8t48331H Brassica oleracea
BolC8t48332H Brassica oleracea
BolC9t57573H Brassica oleracea
BraA01t02056Z Brassica rapa
BraA03t14512Z Brassica rapa
BraA07t28757Z Brassica rapa
BraA08t33211Z Brassica rapa
BraA10t43426Z Brassica rapa
C01p26840 Brassica napus
C01p28220 Brassica napus
C08p28790 Brassica napus
C09p47190 Brassica napus
CAN.G480.17 Capsicum annuum
CAN.G600.5 Capsicum annuum
CAN.G600.6 Capsicum annuum
CANSAT25G2302 Cannabis sativa
CANSAT35G0611 Cannabis sativa
CARHR153810 Cardamine hirsuta
CARHR153820 Cardamine hirsuta
CARHR153830 Cardamine hirsuta
CARHR222420 Cardamine hirsuta
Carub.0005s0889 Capsella rubella
Carub.0007s2548 Capsella rubella
Ca_12844_v3 Cicer arietinum L.
CBR_g29486 Chara braunii
Cc00_g00350 Coffea canephora
Cc11_g03230 Coffea canephora
CDE04G1758 Ceratophyllum demersum
CDE07G1244 Ceratophyllum demersum
Cfa013311 Carpinus fangiana
Ciclev10007339m.g Citrus clementina
CiPaw.07G209700 Carya illinoinensis
CiPaw.08G021400 Carya illinoinensis
ClCG05G026320 Citrullus lanatus
ClCG10G008570 Citrullus lanatus
COL.COLO4_18626 Corchorus olitorius
Cpa.g.c41137 Carica papaya
Cpa.g.sc115.31 Carica papaya
Cpa.g.sc148.1 Carica papaya
Cre03.g185300 Chlamydomonas reinhardtii
CsaV3_3G047280 Cucumis sativus L.
CsaV3_4G009070 Cucumis sativus L.
CSS0012006 Camellia sinensis var. sinensis
DCAR_000671 Daucus carota
DCAR_004565 Daucus carota
Dinv37495 Davidia involucrata
Dinv38809 Davidia involucrata
Duzib168G0110 Durio zibethinus
ECA246G1707 Erigeron canadensis
EL10Ac2g03697 Beta vulgaris
Eucgr.C02132 Eucalyptus grandis
FAN15G0923 Fragaria x ananassa
FAN20G1933 Fragaria x ananassa
FAN27G0986 Fragaria x ananassa
FvH4_2g36460 Fragaria vesca
Glyma.14G138300 Glycine max
Glyma.17G194400 Glycine max
Gohir.A06G107500 Gossypium hirsutum
Gohir.D06G109800 Gossypium hirsutum
Gorai.010G124600 Gossypium raimondii
GSVIVG01032250001 Vitis vinifera
GSVIVG01035565001 Vitis vinifera
HanXRQChr12g0384051 Helianthus annuus
HanXRQChr17g0539291 Helianthus annuus
Haze_18803 Corylus avellana
Haze_19055 Corylus avellana
Haze_21795 Corylus avellana
Hma1.2p1_0284F.1_g113850 Hydrangea macrophylla
Hma1.2p1_0307F.1_g119990 Hydrangea macrophylla
Hma1.2p1_0331F.1_g127520 Hydrangea macrophylla
HPP92_010414 Vanilla planifolia
HPP92_017382 Vanilla planifolia
Hund19395 Selenicereus undatus
Lalb_Chr08g0243461 Lupinus albus
Lalb_Chr22g0361171 Lupinus albus
Lj3C988G10 Lonicera japonica
Lj4A539T56 Lonicera japonica
Lj4A545T6 Lonicera japonica
Lj5g0024079 Lotus japonicus
Lj6A548G18 Lonicera japonica
Lj7A754G40 Lonicera japonica
Lj7A754T37 Lonicera japonica
Lj7C753T13 Lonicera japonica
Lj7C754T6 Lonicera japonica
Lsat_1_v5_gn_1_87560 Lactuca sativa
Lsat_1_v5_gn_3_26460 Lactuca sativa
Lsat_1_v5_gn_5_2240 Lactuca sativa
Lsat_1_v5_gn_5_29660 Lactuca sativa
Lsat_1_v5_gn_5_45060 Lactuca sativa
Lsat_1_v5_gn_5_56521 Lactuca sativa
Lsat_1_v5_gn_6_14080 Lactuca sativa
Manes.03G001300 Manihot esculenta
Manes.16G137600 Manihot esculenta
Mapoly0043s0024 Marchantia polymorpha
MBI16_g37213_MAGBIO Magnolia biondii
MCO10G390 Micromonas commoda
MD08G1124400 Malus domestica
MD15G1103100 Malus domestica
Medtr1g009190 Medicago truncatula
MELO3C003601.2 Cucumis melo
MELO3C018969.2 Cucumis melo
Migut.A00453 Erythranthe guttata
MSTRG.10465 Avicennia marina
MSTRG.11818 Avicennia marina
MSTRG.25768 Avicennia marina
Nitab4.5_0000899g0120 Nicotiana tabacum
Nitab4.5_0000970g0150 Nicotiana tabacum
Nitab4.5_0000970g0160 Nicotiana tabacum
Nitab4.5_0001535g0040 Nicotiana tabacum
Nitab4.5_0001535g0050 Nicotiana tabacum
Nitab4.5_0001942g0140 Nicotiana tabacum
Nn5g27632 Nelumbo nucifera
Nn8g41097 Nelumbo nucifera
Oeu028830.2 Olea europaea
Oeu059291.2 Olea europaea
Os02g0141300 Oryza sativa ssp. japonica
Os06g0702500 Oryza sativa ssp. japonica
Peaxi162Scf00213g00943 Petunia axillaris
Peaxi162Scf00320g00216 Petunia axillaris
PGR084G0004 Punica granatum
PGR142G1783 Punica granatum
PGR142G2777 Punica granatum
PGSC0003DMG400009774 Solanum tuberosum
PGSC0003DMG401029558 Solanum tuberosum
Phvul.001G077700 Phaseolus vulgaris
Potri.018G003100 Populus trichocarpa
Potri.018G138202 Populus trichocarpa
Potri.018G138204 Populus trichocarpa
Potri.018G145700 Populus trichocarpa
Pp3c16_4920 Physcomitrium patens
Pp3c6_8620 Physcomitrium patens
PRCOL_00002758 Prasinoderma coloniale
Prupe.1G456000 Prunus persica
Psat0s2005g0040 Pisum sativum
Psat0s2005g0080 Pisum sativum
Psat0s2005g0120 Pisum sativum
Psat0s4805g0040 Pisum sativum
Psat0s4805g0080 Pisum sativum
Psat0s4805g0160 Pisum sativum
Psat6g034400 Pisum sativum
PSO017G2807 Papaver somniferum
PSO170G4524 Papaver somniferum
PSO210G0091 Papaver somniferum
PSO384G4598 Papaver somniferum
PSO675G1851 Papaver somniferum
PSO675G2070 Papaver somniferum
PSO675G2426 Papaver somniferum
PSO675G7617 Papaver somniferum
QL11p009227 Quercus lobata
QL11p011549 Quercus lobata
QL12p025856 Quercus lobata
QL12p025860 Quercus lobata
QL12p025880 Quercus lobata
RcHm_v2.0_Chr6g0305421 Rosa chinensis
Rhsim04G0184400 Rhododendron simsii
Sabra18G0002400 Salix brachista
Sabra18G0002700 Salix brachista
Sabra18G0002900 Salix brachista
Sabra18G0006300 Salix brachista
Sabra18G0006600 Salix brachista
Sabra18G0007300 Salix brachista
Sabra18G0008300 Salix brachista
Sabra18G0008500 Salix brachista
Sabra18G0009800 Salix brachista
Sabra18G0016400 Salix brachista
Sabra18G0120000 Salix brachista
Sabra18G0127600 Salix brachista
SalBow4G0158 Salvia bowleyana
SalBow5G2825 Salvia bowleyana
SalBow5G3535 Salvia bowleyana
Sc06g0001240 Simmondsia chinensis
Sed0009215 Sechium edule
SEGI_07719 Sequoiadendron giganteum
SEGI_12182 Sequoiadendron giganteum
SEGI_16999 Sequoiadendron giganteum
SEGI_18411 Sequoiadendron giganteum
SEGI_20112 Sequoiadendron giganteum
SEGI_21242 Sequoiadendron giganteum
SEGI_21807 Sequoiadendron giganteum
SEGI_24117 Sequoiadendron giganteum
SEGI_31197 Sequoiadendron giganteum
SEGI_34510 Sequoiadendron giganteum
SEGI_34808 Sequoiadendron giganteum
SEGI_37495 Sequoiadendron giganteum
SEGI_37547 Sequoiadendron giganteum
SEGI_40544 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11655 Striga asiatica
SHI02366 Sapria himalayana
SMO146G0086 Selaginella moellendorffii
Solyc07g016160.3 Solanum lycopersicum
Solyc07g016170.4 Solanum lycopersicum
Solyc08g069231.1 Solanum lycopersicum
Sopen00g003660 Solanum pennellii
Sopen00g003670 Solanum pennellii
Sopen07g005900 Solanum pennellii
Sopen08g022860 Solanum pennellii
Sp6g17930 Schrenkiella parvula
Sp7g14590 Schrenkiella parvula
TAR383G0086 Trochodendron aralioides
THA.LOC104802597 Tarenaya hassleriana
THA.LOC104810997 Tarenaya hassleriana
THA.LOC104820278 Tarenaya hassleriana
Thecc.09G002800 Theobroma cacao
Thhalv10012582m.g Eutrema salsugineum
Thhalv10024313m.g Eutrema salsugineum
TPR.G12004 Trifolium pratense
TWI32G0829 Tripterygium wilfordii
unitig_32.g11648 Utricularia gibba
unitig_748.g8176 Utricularia gibba
vmacro08496 Vaccinium macrocarpon
vmacro23159 Vaccinium macrocarpon
VMungo0647G1266 Vigna mungo
Zm00001eb195690 Zea mays
Zm00001eb208110 Zea mays
Zm00001eb227090 Zea mays
Zm00001eb315700 Zea mays
Zm00001eb347750 Zea mays

User provided reference genes

Program Settings