Gene: Sopen08g022860
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g022860
- Transcript Identifier Sopen08g022860.1
- Gene Type Coding gene
- Location Spenn-ch08 : 62417976-62434030 : positive
Gene Family Information
- ID HOM05D002718
- #Genes/#Species 253/100
- Phylogenetic origin
- ID ORTHO05D003269
- #Genes/#Species 233/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen08g022860.1
Descriptions
- Description Similar to galactokinase. | arabinose kinase (ARA1) | FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity | INVOLVED IN: arabinose metabolic process | LOCATED IN: cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase , Galactokinase galactose-binding domain , Ribosomal protein S5 domain 2-type fold , GHMP kinase , Galactokinase, glycosyltransferase , Ribosomal protein S5 domain 2-type fold, subgroup | BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006396 | ISO | PLAZA Integrative Orthology | RNA processing | AT4G16130 |
GO:0019566 | ISO | PLAZA Integrative Orthology | arabinose metabolic process | AT4G16130 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0003824 | ISO | PLAZA Integrative Orthology | catalytic activity | AT4G16130 |
GO:0009702 | ISO | PLAZA Integrative Orthology | L-arabinokinase activity | AT4G16130 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G16130 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G16130 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR012369 | Galactokinase, glycosyltransferase |
IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
IPR019539 | Galactokinase, N-terminal domain |
IPR036554 | GHMP kinase, C-terminal domain superfamily |
IPR006204 | GHMP kinase N-terminal domain |
IPR020568 | Ribosomal protein S5 domain 2-type fold |
IPR013750 | GHMP kinase, C-terminal domain |
Mapman id | Description |
---|---|
3.13.7.2.1 | Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose biosynthesis.salvage biosynthesis.L-arabinose kinase |