Gene: Sopen08g022860

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g022860
  • Transcript Identifier Sopen08g022860.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 62417976-62434030 : positive

Gene Family Information

  • ID HOM05D002718
  • #Genes/#Species 253/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g022860.1

Descriptions

  • Description Similar to galactokinase. | arabinose kinase (ARA1) | FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity | INVOLVED IN: arabinose metabolic process | LOCATED IN: cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase , Galactokinase galactose-binding domain , Ribosomal protein S5 domain 2-type fold , GHMP kinase , Galactokinase, glycosyltransferase , Ribosomal protein S5 domain 2-type fold, subgroup | BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
ISO
PLAZA Integrative OrthologyRNA processing AT4G16130
GO:0019566
ISO
PLAZA Integrative Orthologyarabinose metabolic process AT4G16130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0003824
ISO
PLAZA Integrative Orthologycatalytic activity AT4G16130
GO:0009702
ISO
PLAZA Integrative OrthologyL-arabinokinase activity AT4G16130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G16130
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G16130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012369 Galactokinase, glycosyltransferase
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR019539 Galactokinase, N-terminal domain
IPR036554 GHMP kinase, C-terminal domain superfamily
IPR006204 GHMP kinase N-terminal domain
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR013750 GHMP kinase, C-terminal domain
Mapman id Description
3.13.7.2.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose biosynthesis.salvage biosynthesis.L-arabinose kinase