Gene: Nitab4.5_0001942g0140
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0001942g0140
- Transcript Identifier Nitab4.5_0001942g0140.1
- Gene Type Coding gene
- Location Nitab4.5_0001942 : 409121-430656 : positive
Gene Family Information
- ID HOM05D002718
- #Genes/#Species 253/100
- Phylogenetic origin
- ID ORTHO05D003269
- #Genes/#Species 233/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0001942g0140.1
- SR1-identifier Nta16g13570.1
Descriptions
- Description GHMP kinase, C-terminal domain, Ribosomal protein S5 domain 2-type fold, GHMP kinase N-terminal domain, Ribosomal protein S5 domain 2-type fold, subgroup, Galactokinase galactose-binding domain, Mevalonate/galactokinase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | ISO | PLAZA Integrative Orthology | RNA processing | AT4G16130 |
| GO:0019566 | ISO | PLAZA Integrative Orthology | arabinose metabolic process | AT4G16130 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003824 | ISO | PLAZA Integrative Orthology | catalytic activity | AT4G16130 |
| GO:0009702 | ISO | PLAZA Integrative Orthology | L-arabinokinase activity | AT4G16130 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G16130 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G16130 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019539 | Galactokinase, N-terminal domain |
| IPR036554 | GHMP kinase, C-terminal domain superfamily |
| IPR006204 | GHMP kinase N-terminal domain |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR013750 | GHMP kinase, C-terminal domain |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| Mapman id | Description |
|---|---|
| 3.13.7.2.1 | Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose biosynthesis.salvage biosynthesis.L-arabinose kinase |