Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p35550 Brassica napus
Aa31LG11G3960 Aethionema arabicum
Actinidia10124 Actinidia chinensis
Actinidia10126 Actinidia chinensis
Actinidia10128 Actinidia chinensis
Actinidia28837 Actinidia chinensis
Ah.05g169290 Amaranthus hybridus
AL2G24790 Arabidopsis lyrata
AL2G24800 Arabidopsis lyrata
AL6G36330 Arabidopsis lyrata
Aqoxy2G01525 Aquilegia oxysepala
Aqoxy4G01176 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21MRAZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8RHS4X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FGIJ89 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G9A448 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GW217K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LDE891 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LJ799F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P3JCM3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4FA7I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0I0AR Arachis hypogaea
AT5G24740 Arabidopsis thaliana
ATR1155G033 Amborella trichopoda
Atru.chr8.1038_Atru.chr8.1039 Acer truncatum
Atru.chr8.1040 Acer truncatum
AUR62007656 Chenopodium quinoa
AUR62013467 Chenopodium quinoa
AUR62026805 Chenopodium quinoa
BcaNung01253 Brassica carinata
BolC7t44828H Brassica oleracea
BraA06t26480Z Brassica rapa
C07p42990 Brassica napus
CAN.G690.1 Capsicum annuum
CANSAT01G2419 Cannabis sativa
CARHR073190 Cardamine hirsuta
CARHR188760 Cardamine hirsuta
Carub.0006s2259 Capsella rubella
Ca_01486_v3 Cicer arietinum L.
Ca_09437_v3 Cicer arietinum L.
Ca_14756_v3 Cicer arietinum L.
Ca_14757_v3 Cicer arietinum L.
Ca_14758_v3 Cicer arietinum L.
Ca_19993_v3 Cicer arietinum L.
Ca_20561_v3 Cicer arietinum L.
Ca_27225_v3 Cicer arietinum L.
Ca_27667_v3 Cicer arietinum L.
Ca_30710_v3 Cicer arietinum L.
CBR_g18614 Chara braunii
CBR_g18616 Chara braunii
CBR_g4651 Chara braunii
CBR_g47049 Chara braunii
CBR_g47051 Chara braunii
Cc11_g00280 Coffea canephora
Cc11_g00290 Coffea canephora
Cc11_g00300 Coffea canephora
Cc11_g00310 Coffea canephora
CDE12G0934 Ceratophyllum demersum
Cfa016258 Carpinus fangiana
Ciclev10010886m.g Citrus clementina
Ciclev10012577m.g Citrus clementina
Ciclev10013321m.g Citrus clementina
Ciclev10013786m.g Citrus clementina
CiPaw.06G000200 Carya illinoinensis
CiPaw.06G000300 Carya illinoinensis
CiPaw.06G000500 Carya illinoinensis
CiPaw.06G000600 Carya illinoinensis
ClCG03G010410 Citrullus lanatus
ClCG03G010430 Citrullus lanatus
ClCG03G010440 Citrullus lanatus
COL.COLO4_33574 Corchorus olitorius
COL.COLO4_33575 Corchorus olitorius
Cpa.g.c28352.1 Carica papaya
Cpa.g.c28352.2 Carica papaya
Cpa.g.sc119.1 Carica papaya
Cpa.g.sc119.2 Carica papaya
Cre10.g441650 Chlamydomonas reinhardtii
Cre17.g727600 Chlamydomonas reinhardtii
CsaV3_1G044330 Cucumis sativus L.
CsaV3_1G044340 Cucumis sativus L.
CsaV3_1G044350 Cucumis sativus L.
CSS0026519 Camellia sinensis var. sinensis
CSS0038262 Camellia sinensis var. sinensis
CSS0041142 Camellia sinensis var. sinensis
CSS0044031 Camellia sinensis var. sinensis
CSS0047039 Camellia sinensis var. sinensis
DCAR_018920 Daucus carota
Dinv38369 Davidia involucrata
Duzib114G0204 Durio zibethinus
ECA233G1976 Erigeron canadensis
EL10Ac1g01415 Beta vulgaris
Eucgr.F02119 Eucalyptus grandis
Eucgr.K01355 Eucalyptus grandis
Eucgr.K01356 Eucalyptus grandis
Eucgr.K01358 Eucalyptus grandis
FAN02G0462 Fragaria x ananassa
FAN05G4926 Fragaria x ananassa
FAN09G4442 Fragaria x ananassa
FAN14G0870 Fragaria x ananassa
FAN14G5588 Fragaria x ananassa
FvH4_6g36300 Fragaria vesca
Glyma.13G174600 Glycine max
Gohir.A04G088400 Gossypium hirsutum
Gohir.A05G199033 Gossypium hirsutum
Gohir.A05G394600 Gossypium hirsutum
Gohir.A08G075400 Gossypium hirsutum
Gohir.A11G129200 Gossypium hirsutum
Gohir.A12G149700 Gossypium hirsutum
Gohir.D04G020301 Gossypium hirsutum
Gohir.D04G020351 Gossypium hirsutum
Gorai.012G024100 Gossypium raimondii
Gorai.012G024500 Gossypium raimondii
GSVIVG01019366001 Vitis vinifera
GSVIVG01019369001 Vitis vinifera
GSVIVG01019371001 Vitis vinifera
HanXRQChr07g0186761 Helianthus annuus
Haze_24502 Corylus avellana
Haze_24503 Corylus avellana
Haze_24505 Corylus avellana
Haze_24506 Corylus avellana
Hma1.2p1_1074F.1_g254360 Hydrangea macrophylla
Hma1.2p1_1074F.1_g254370 Hydrangea macrophylla
Hma1.2p1_1074F.1_g254373 Hydrangea macrophylla
Hma1.2p1_1074F.1_g254376 Hydrangea macrophylla
Hma1.2p1_1074F.1_g254380 Hydrangea macrophylla
Hma1.2p1_2738F.1_g327700 Hydrangea macrophylla
Hma1.2p1_2738F.1_g327710 Hydrangea macrophylla
Hma1.2p1_2738F.1_g327720 Hydrangea macrophylla
HPP92_000045 Vanilla planifolia
HPP92_001355 Vanilla planifolia
HPP92_001359 Vanilla planifolia
HPP92_001360 Vanilla planifolia
HPP92_001361 Vanilla planifolia
HPP92_001362 Vanilla planifolia
HPP92_001377 Vanilla planifolia
HPP92_001397 Vanilla planifolia
HPP92_010163 Vanilla planifolia
HPP92_012166 Vanilla planifolia
HPP92_012167 Vanilla planifolia
Hund04713 Selenicereus undatus
Hund04715 Selenicereus undatus
Lalb_Chr01g0009381 Lupinus albus
Lj4A824G18 Lonicera japonica
Lj4A824T16 Lonicera japonica
Lj4C825G3 Lonicera japonica
Lj4g0020533 Lotus japonicus
LjContig00141g0016117 Lotus japonicus
Lsat_1_v5_gn_1_69101 Lactuca sativa
Lsat_1_v5_gn_4_86300 Lactuca sativa
Lsat_1_v5_gn_5_71700 Lactuca sativa
Lsat_1_v5_gn_6_118061 Lactuca sativa
Lsat_1_v5_gn_6_56501 Lactuca sativa
Lsat_1_v5_gn_7_107220 Lactuca sativa
Lsat_1_v5_gn_7_38641 Lactuca sativa
Lsat_1_v5_gn_8_5081 Lactuca sativa
Lsat_1_v5_gn_9_71520 Lactuca sativa
Lsat_1_v5_gn_9_85160 Lactuca sativa
Manes.09G076300 Manihot esculenta
Manes.11G165700 Manihot esculenta
Manes.12G000066 Manihot esculenta
Mapoly0009s0011 Marchantia polymorpha
MBI12_g09298_MAGBIO Magnolia biondii
MCO01G574 Micromonas commoda
MD09G1170300 Malus domestica
MD17G1156800 Malus domestica
Medtr2g007250 Medicago truncatula
MELO3C010025.2 Cucumis melo
MELO3C010026.2 Cucumis melo
MELO3C010033.2 Cucumis melo
MELO3C029604.2 Cucumis melo
Migut.L00525 Erythranthe guttata
Migut.L00786 Erythranthe guttata
Migut.L00787 Erythranthe guttata
Migut.L00839 Erythranthe guttata
Migut.L00840 Erythranthe guttata
Migut.L00841 Erythranthe guttata
MSTRG.8096 Avicennia marina
Nitab4.5_0002474g0040 Nicotiana tabacum
Nitab4.5_0004202g0010 Nicotiana tabacum
Nitab4.5_0004202g0020 Nicotiana tabacum
Nitab4.5_0004950g0030 Nicotiana tabacum
Nitab4.5_0004950g0050 Nicotiana tabacum
Nitab4.5_0006025g0010 Nicotiana tabacum
Nitab4.5_0006025g0020 Nicotiana tabacum
Nitab4.5_0020732g0010 Nicotiana tabacum
Nn7g37406 Nelumbo nucifera
Nn7g38445 Nelumbo nucifera
Nn7g38446 Nelumbo nucifera
Oeu013190.1 Olea europaea
Oeu013191.1 Olea europaea
Os08g0116566 Oryza sativa ssp. japonica
Os08g0116700 Oryza sativa ssp. japonica
Peaxi162Scf00126g00051 Petunia axillaris
Peaxi162Scf00126g00524 Petunia axillaris
PGR044G0026 Punica granatum
PGSC0003DMG400022861 Solanum tuberosum
Phvul.002G234304 Phaseolus vulgaris
Phvul.002G234308 Phaseolus vulgaris
Phvul.002G234312 Phaseolus vulgaris
Phvul.002G328600 Phaseolus vulgaris
Phvul.002G328604 Phaseolus vulgaris
Phvul.002G328704 Phaseolus vulgaris
Potri.001G455600 Populus trichocarpa
Pp3c15_25690 Physcomitrium patens
PRCOL_00001171 Prasinoderma coloniale
PRCOL_00005014 Prasinoderma coloniale
PRCOL_00006863 Prasinoderma coloniale
Prupe.3G028500 Prunus persica
Psat0s3513g0080 Pisum sativum
Psat2g178200 Pisum sativum
PSO063G3289 Papaver somniferum
PSO782G1285 Papaver somniferum
QL04p064964 Quercus lobata
QL04p064992 Quercus lobata
RcHm_v2.0_Chr2g0148301 Rosa chinensis
RcHm_v2.0_Chr2g0148311 Rosa chinensis
RcHm_v2.0_Chr5g0051461 Rosa chinensis
Rhsim13G0127300 Rhododendron simsii
Sabra16G0308200 Salix brachista
SalBow1G2769 Salvia bowleyana
SalBow1G3632 Salvia bowleyana
Sc15g0007450 Simmondsia chinensis
Sed0003631 Sechium edule
Sed0013773 Sechium edule
Sed0020559 Sechium edule
SEGI_11936 Sequoiadendron giganteum
SEGI_23454 Sequoiadendron giganteum
SEGI_29400 Sequoiadendron giganteum
SEGI_36671 Sequoiadendron giganteum
SEGI_37137 Sequoiadendron giganteum
SEGI_37635 Sequoiadendron giganteum
SGA_v2.0_scaffold131G34416 Striga asiatica
SGA_v2.0_scaffold169G38730 Striga asiatica
SMO302G0008 Selaginella moellendorffii
SMO353G0198 Selaginella moellendorffii
SMO353G0260 Selaginella moellendorffii
Solyc11g045140.1 Solanum lycopersicum
Solyc11g045160.3 Solanum lycopersicum
Sopen11g020620 Solanum pennellii
Sp2g22690 Schrenkiella parvula
TAR624G0800 Trochodendron aralioides
TAR624G1146 Trochodendron aralioides
THA.LOC104814962 Tarenaya hassleriana
Thecc.01G150000 Theobroma cacao
Thhalv10003500m.g Eutrema salsugineum
TPR.G8155 Trifolium pratense
TWI34G1636 Tripterygium wilfordii
unitig_8.g3108 Utricularia gibba
unitig_8.g3109 Utricularia gibba
vmacro03484 Vaccinium macrocarpon
vmacro03485 Vaccinium macrocarpon
vmacro03486 Vaccinium macrocarpon
VMungo0251G0195 Vigna mungo
VMungo0251G1383 Vigna mungo
VMungo0251G2462 Vigna mungo
VMungo0251G2657 Vigna mungo
VMungo0251G2737 Vigna mungo
Zm00001eb260890 Zea mays
Zm00001eb260910 Zea mays

User provided reference genes

Program Settings