Gene: Solyc11g045160.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc11g045160.3
Transcript Identifier Solyc11g045160.3.1
Gene Type Coding gene
Location SL4.0ch11 : 30280032-30323063 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002653
#Genes/#Species 259/98
Phylogenetic origin

ID ORTHO05D002623
#Genes/#Species 274/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Solyc11g045160.3.1
uniprot A0A3Q7IWD9
gene_id Solyc11g045160

Descriptions

Short descriptions
Ortholog descriptions

Description Vacuolar protein sorting-associated protein, putative (DUF1162) (AHRD V3.3 *** A0A1P8BEF0_ARATH)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006623	IBA	GOA Database	protein targeting to vacuole
GO:0045053	IBA	GOA Database	protein retention in Golgi apparatus
GO:0010082	ISO	PLAZA Integrative Orthology	regulation of root meristem growth	AT5G24740
GO:1990064	ISO	PLAZA Integrative Orthology	ground tissue pattern formation	AT5G24740
GO:0010015	ISO	PLAZA Integrative Orthology	root morphogenesis	AT5G24740

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0019898	IBA	GOA Database	extrinsic component of membrane

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR031642	VPS13, repeated coiled region
IPR031646	Vacuolar protein sorting-associated protein 13, second N-terminal domain
IPR009543	Vacuolar protein sorting-associated protein 13, SHR-binding domain
IPR026847	Vacuolar protein sorting-associated protein 13

Mapman id	Description
35.1	not assigned.annotated