Gene: Lsat_1_v5_gn_8_5081
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_8_5081
- Transcript Identifier Lsat_1_v5_gn_8_5081.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_8 : 6796667-6810980 : positive
Gene Family Information
- ID HOM05D002653
- #Genes/#Species 259/98
- Phylogenetic origin
- ID ORTHO05D002623
- #Genes/#Species 274/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_8_5081.v5
- pacid 38950173
Descriptions
- Description PF06650//PF12624//PF16908//PF16909//PF16910 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Vacuolar-sorting-associated 13 protein C-terminal (VPS13_C) // Repeating coiled region of VPS13 (VPS13_mid_rpt)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010082 | ISO | PLAZA Integrative Orthology | regulation of root meristem growth | AT5G24740 |
| GO:1990064 | ISO | PLAZA Integrative Orthology | ground tissue pattern formation | AT5G24740 |
| GO:0010015 | ISO | PLAZA Integrative Orthology | root morphogenesis | AT5G24740 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009543 | Vacuolar protein sorting-associated protein 13, SHR-binding domain |
| IPR031645 | Vacuolar protein sorting-associated protein 13, C-terminal |
| IPR031646 | Vacuolar protein sorting-associated protein 13, second N-terminal domain |
| IPR026854 | Vacuolar protein sorting-associated protein 13-like, N-terminal domain |
| IPR031642 | VPS13, repeated coiled region |
| IPR026847 | Vacuolar protein sorting-associated protein 13 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |