Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p40580 Brassica napus
A05p31530 Brassica napus
A08p28400 Brassica napus
A09p41790 Brassica napus
Aa31LG10G4720 Aethionema arabicum
Aa31LG7G6960 Aethionema arabicum
Aa31LG8G5050 Aethionema arabicum
Aa31LG9G4990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1761 Anthoceros agrestis
Actinidia14932 Actinidia chinensis
Actinidia16694 Actinidia chinensis
Actinidia29146 Actinidia chinensis
Actinidia31782 Actinidia chinensis
Ah.07g207710 Amaranthus hybridus
AL1G25020 Arabidopsis lyrata
AL1G36510 Arabidopsis lyrata
AL1G55392 Arabidopsis lyrata
AL1G55394 Arabidopsis lyrata
AL3G31400 Arabidopsis lyrata
Aqoxy3G00179 Aquilegia oxysepala
Aqoxy7G01660 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.83UPDK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CI1GV9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G05VUU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KWLE9P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5S011 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y1J3AA Arachis hypogaea
AT1G22950 Arabidopsis thaliana
AT1G47940 Arabidopsis thaliana
AT1G48700 Arabidopsis thaliana
AT1G48740 Arabidopsis thaliana
AT3G18210 Arabidopsis thaliana
AT5G43660 Arabidopsis thaliana
ATR0589G011 Amborella trichopoda
Atru.chr11.321 Acer truncatum
Atru.chr9.930 Acer truncatum
AUR62002212 Chenopodium quinoa
AUR62015487 Chenopodium quinoa
BcaB03g11917 Brassica carinata
BcaB03g14178 Brassica carinata
BcaB04g18982 Brassica carinata
BcaB07g32293 Brassica carinata
BcaC01g03705 Brassica carinata
BcaC05g26201 Brassica carinata
BcaC05g28654 Brassica carinata
BcaC06g35006 Brassica carinata
BcaC07g39179 Brassica carinata
BolC3t17233H Brassica oleracea
BolC5t30905H Brassica oleracea
BolC5t33495H Brassica oleracea
BolC7t42611H Brassica oleracea
BolC8t49807H Brassica oleracea
BraA03t13215Z Brassica rapa
BraA05t21988Z Brassica rapa
BraA08t34770Z Brassica rapa
BraA09t39667Z Brassica rapa
C03p49390 Brassica napus
C05p22090 Brassica napus
C05p47830 Brassica napus
C07p20790 Brassica napus
C08p21690 Brassica napus
CAN.G1122.1 Capsicum annuum
CAN.G1489.21 Capsicum annuum
CAN.G360.3 Capsicum annuum
CAN.G851.31 Capsicum annuum
CANSAT80G1736 Cannabis sativa
CARHR023330 Cardamine hirsuta
CARHR038650 Cardamine hirsuta
CARHR038660 Cardamine hirsuta
CARHR093540 Cardamine hirsuta
Carub.0001s2245 Capsella rubella
Carub.0001s3786 Capsella rubella
Carub.0001s3787 Capsella rubella
Carub.0001s3788 Capsella rubella
Carub.0003s1796 Capsella rubella
Ca_11120_v3 Cicer arietinum L.
Ca_17230_v3 Cicer arietinum L.
Ca_25462_v3 Cicer arietinum L.
Cc11_g09340 Coffea canephora
CDE04G1760 Ceratophyllum demersum
CDE06G1193 Ceratophyllum demersum
CDE07G0021 Ceratophyllum demersum
Cfa015822 Carpinus fangiana
Cfa019720 Carpinus fangiana
Ciclev10008539m.g Citrus clementina
Ciclev10015622m.g Citrus clementina
CiPaw.06G015300 Carya illinoinensis
CiPaw.15G138100 Carya illinoinensis
ClCG01G005980 Citrullus lanatus
COL.COLO4_26850 Corchorus olitorius
Cpa.g.sc3.452 Carica papaya
Cpa.g.sc65.82 Carica papaya
Cpa.g.sc65.84 Carica papaya
CsaV3_5G028700 Cucumis sativus L.
CSS0020505 Camellia sinensis var. sinensis
CSS0039889 Camellia sinensis var. sinensis
DCAR_007273 Daucus carota
DCAR_011030 Daucus carota
Dinv04914 Davidia involucrata
Dinv16156 Davidia involucrata
Duzib160G0102 Durio zibethinus
Duzib192G0889 Durio zibethinus
ECA234G2071 Erigeron canadensis
ECA246G0785 Erigeron canadensis
EL10Ac3g05853 Beta vulgaris
Eucgr.B02862 Eucalyptus grandis
Eucgr.K02241 Eucalyptus grandis
FAN04G0873 Fragaria x ananassa
FAN07G1285 Fragaria x ananassa
FAN08G0697 Fragaria x ananassa
FAN12G1101 Fragaria x ananassa
FAN12G2248 Fragaria x ananassa
FAN13G2250 Fragaria x ananassa
FAN17G1851 Fragaria x ananassa
FAN18G0079 Fragaria x ananassa
FAN22G2208 Fragaria x ananassa
FvH4_4g26460 Fragaria vesca
FvH4_5g16830 Fragaria vesca
Glyma.07G099600 Glycine max
Glyma.09G179300 Glycine max
Glyma.10G268600 Glycine max
Glyma.10G268700 Glycine max
Glyma.20G122300 Glycine max
Glyma.20G122400 Glycine max
Gohir.A03G079900 Gossypium hirsutum
Gohir.A06G119700 Gossypium hirsutum
Gohir.D02G103900 Gossypium hirsutum
Gohir.D06G124800 Gossypium hirsutum
Gorai.005G118000 Gossypium raimondii
Gorai.010G144300 Gossypium raimondii
GSVIVG01008354001 Vitis vinifera
GSVIVG01011812001 Vitis vinifera
HanXRQChr13g0388321 Helianthus annuus
HanXRQChr13g0406861 Helianthus annuus
HanXRQChr15g0477761 Helianthus annuus
HanXRQChr16g0529551 Helianthus annuus
HanXRQChr16g0529561 Helianthus annuus
HanXRQChr17g0553111 Helianthus annuus
HanXRQChr17g0567111 Helianthus annuus
Haze_00673 Corylus avellana
Haze_18765 Corylus avellana
Hma1.2p1_0114F.1_g055530 Hydrangea macrophylla
Hma1.2p1_0882F.1_g232220 Hydrangea macrophylla
HPP92_008229 Vanilla planifolia
Hund11833 Selenicereus undatus
Hund13806 Selenicereus undatus
Lalb_Chr02g0145681 Lupinus albus
Lalb_Chr06g0165781 Lupinus albus
Lalb_Chr09g0330631 Lupinus albus
Lalb_Chr14g0370861 Lupinus albus
Lalb_Chr22g0353291 Lupinus albus
Lj1g0021972 Lotus japonicus
Lj2g0009136 Lotus japonicus
Lj3A878T23 Lonicera japonica
Lj4g0009469 Lotus japonicus
Lj5g0020697 Lotus japonicus
Lj6A751T56 Lonicera japonica
Lsat_1_v5_gn_2_128261 Lactuca sativa
Lsat_1_v5_gn_3_56640 Lactuca sativa
Lsat_1_v5_gn_4_14760 Lactuca sativa
Lsat_1_v5_gn_9_7541 Lactuca sativa
Manes.01G016000 Manihot esculenta
Manes.14G108800 Manihot esculenta
Mapoly0046s0031 Marchantia polymorpha
MCO04G328 Micromonas commoda
MCO07G328 Micromonas commoda
MD13G1033500 Malus domestica
MD14G1231400 Malus domestica
MD16G1035400 Malus domestica
Medtr1g109230 Medicago truncatula
Medtr6g081860 Medicago truncatula
Medtr8g106610 Medicago truncatula
MELO3C005334.2 Cucumis melo
Migut.L01013 Erythranthe guttata
MSTRG.7634 Avicennia marina
Nitab4.5_0000350g0080 Nicotiana tabacum
Nitab4.5_0001840g0020 Nicotiana tabacum
Nitab4.5_0001861g0180 Nicotiana tabacum
Nitab4.5_0002156g0080 Nicotiana tabacum
Nitab4.5_0002156g0090 Nicotiana tabacum
Nitab4.5_0002156g0100 Nicotiana tabacum
Nitab4.5_0003886g0080 Nicotiana tabacum
Nn4g24005 Nelumbo nucifera
Oeu048384.2 Olea europaea
Oeu057773.3 Olea europaea
Os01g0180900 Oryza sativa ssp. japonica
Os01g0502400 Oryza sativa ssp. japonica
Peaxi162Scf00189g01217 Petunia axillaris
Peaxi162Scf00205g01133 Petunia axillaris
PGR044G0031 Punica granatum
PGR102G0233 Punica granatum
PGSC0003DMG400030519 Solanum tuberosum
Phvul.002G326100 Phaseolus vulgaris
Phvul.004G152800 Phaseolus vulgaris
Phvul.007G033600 Phaseolus vulgaris
Phvul.007G033700 Phaseolus vulgaris
Potri.008G125800 Populus trichocarpa
Potri.012G051200 Populus trichocarpa
Potri.015G043100 Populus trichocarpa
Pp3c20_16770 Physcomitrium patens
Pp3c23_2910 Physcomitrium patens
PRCOL_00000299 Prasinoderma coloniale
PRCOL_00005758 Prasinoderma coloniale
PRCOL_00006086 Prasinoderma coloniale
Prupe.1G319300 Prunus persica
Prupe.5G226700 Prunus persica
Psat0s3112g0080 Pisum sativum
Psat1g034200 Pisum sativum
Psat6g223600 Pisum sativum
Psat7g005680 Pisum sativum
PSO063G4142 Papaver somniferum
PSO170G3059 Papaver somniferum
PSO782G4436 Papaver somniferum
QL01p003157 Quercus lobata
QL10p027003 Quercus lobata
QL10p027008 Quercus lobata
RcHm_v2.0_Chr4g0434101 Rosa chinensis
RcHm_v2.0_Chr6g0255821 Rosa chinensis
RcHm_v2.0_Chr6g0274531 Rosa chinensis
RcHm_v2.0_Chr7g0179241 Rosa chinensis
Rhsim09G0102400 Rhododendron simsii
Sabra08G0094800 Salix brachista
Sabra10G0088900 Salix brachista
Sabra15G0042200 Salix brachista
Sabra15G0043600 Salix brachista
SalBow8G4881 Salvia bowleyana
Sc11g0003940 Simmondsia chinensis
Sed0022179 Sechium edule
SEGI_03216 Sequoiadendron giganteum
SEGI_03923 Sequoiadendron giganteum
SEGI_25959 Sequoiadendron giganteum
SEGI_32528 Sequoiadendron giganteum
SEGI_40427 Sequoiadendron giganteum
SGA_v2.0_scaffold38G15028 Striga asiatica
SGA_v2.0_scaffold50G18553 Striga asiatica
SHI19060 Sapria himalayana
SMO334G0067 Selaginella moellendorffii
Solyc04g080877.1 Solanum lycopersicum
Solyc04g080890.4 Solanum lycopersicum
Solyc05g008610.3 Solanum lycopersicum
Sopen04g034470 Solanum pennellii
Sopen04g034480 Solanum pennellii
Sopen05g004450 Solanum pennellii
Sp1g20410 Schrenkiella parvula
Sp3g16320 Schrenkiella parvula
TAR371G0265 Trochodendron aralioides
TAR371G0513 Trochodendron aralioides
TAR622G1349 Trochodendron aralioides
THA.LOC104800391 Tarenaya hassleriana
THA.LOC104820375 Tarenaya hassleriana
Thecc.06G003400 Theobroma cacao
Thhalv10007812m.g Eutrema salsugineum
Thhalv10012237m.g Eutrema salsugineum
Thhalv10020957m.g Eutrema salsugineum
TPR.G12954 Trifolium pratense
TPR.G38523 Trifolium pratense
TPR.G4825 Trifolium pratense
TWI60G0135 Tripterygium wilfordii
unitig_0.g2338 Utricularia gibba
unitig_746.g26866 Utricularia gibba
vmacro10612 Vaccinium macrocarpon
VMungo0464G0984 Vigna mungo
VMungo0720G1380 Vigna mungo
VMungo0720G2199 Vigna mungo
Zm00001eb132300 Zea mays

User provided reference genes

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