Gene: COL.COLO4_26850

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_26850
  • Transcript Identifier COL.rna25577
  • Gene Type Coding gene
  • Location AWUE01019392.1 : 41985-44745 : positive

Gene Family Information

  • ID HOM05D002566
  • #Genes/#Species 265/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna25577
  • GenBank OMO73813.1
  • id gene26822
  • gene_name COLO4_26850
  • uniprot A0A1R3HTX1

Descriptions

  • Description Oxoglutarate/iron-dependent dioxygenase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031936
ISO
PLAZA Integrative Orthologynegative regulation of chromatin silencing AT1G22950
GO:0016571
ISO
PLAZA Integrative Orthologyhistone methylation AT1G22950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016705
IEA
GOA Databaseoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016705
IEA
InterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0031418
IEA
GOA DatabaseL-ascorbic acid binding
GO:0031418
IEA
InterProL-ascorbic acid binding
GO:0005506
IEA
GOA Databaseiron ion binding
GO:0005506
IEA
InterProiron ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G18210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G18210
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT3G18210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006620 Prolyl 4-hydroxylase, alpha subunit
Mapman id Description
12.3.3.2.1.2.7 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.histone H3 demethylase (ICU11/CP)