Gene: Solyc04g080890.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g080890.4
- Transcript Identifier Solyc04g080890.4.1
- Gene Type Coding gene
- Location SL4.0ch04 : 62909222-62912068 : negative
Gene Family Information
- ID HOM05D002566
- #Genes/#Species 265/97
- Phylogenetic origin
- ID ORTHO05D002897
- #Genes/#Species 255/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc04g080890.4.1
- uniprot A0A3Q7GA81
- gene_id Solyc04g080890
Descriptions
- Description 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** Q9LV19_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031936 | ISO | PLAZA Integrative Orthology | negative regulation of chromatin silencing | AT1G22950 |
GO:0016571 | ISO | PLAZA Integrative Orthology | histone methylation | AT1G22950 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005506 | IEA | InterPro | iron ion binding | |
GO:0016705 | IEA | InterPro | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
GO:0031418 | IEA | InterPro | L-ascorbic acid binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G22950 |
GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT1G22950 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR006620 | Prolyl 4-hydroxylase, alpha subunit |
Mapman id | Description |
---|---|
12.3.3.2.1.2.7 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.histone H3 demethylase (ICU11/CP) |