Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03350 Brassica napus
A01p04350 Brassica napus
A01p05670 Brassica napus
A01p05680 Brassica napus
A03p34780 Brassica napus
A03p62600 Brassica napus
A05p37910 Brassica napus
A05p37920 Brassica napus
A05p37930 Brassica napus
A05p41370 Brassica napus
A05p41380 Brassica napus
A08p17150 Brassica napus
Aa31LG2G16510 Aethionema arabicum
Aa31LG2G16950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2821 Anthoceros agrestis
Actinidia00425 Actinidia chinensis
Actinidia12865 Actinidia chinensis
Actinidia12932 Actinidia chinensis
Actinidia17877 Actinidia chinensis
Actinidia27962 Actinidia chinensis
Ah.01g010650 Amaranthus hybridus
Ah.01g017910 Amaranthus hybridus
AL3G17760 Arabidopsis lyrata
AL7G17290 Arabidopsis lyrata
AL7G17300 Arabidopsis lyrata
AL7G19070 Arabidopsis lyrata
Aqoxy5G01185 Aquilegia oxysepala
Aqoxy6G01258 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.92SQ9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IV52NX Arachis hypogaea
AT3G06710 Arabidopsis thaliana
AT4G32670 Arabidopsis thaliana
AT4G34100 Arabidopsis thaliana
ATR0762G060 Amborella trichopoda
Atru.chr5.2641 Acer truncatum
Atru.chr5.2647 Acer truncatum
AUR62010254 Chenopodium quinoa
AUR62013236 Chenopodium quinoa
BcaB03g11857 Brassica carinata
BcaC01g00933 Brassica carinata
BcaC01g00935 Brassica carinata
BcaC05g29375 Brassica carinata
BcaC09g52060 Brassica carinata
BcaC09g52061 Brassica carinata
BcaNung03360 Brassica carinata
BcaNung03790 Brassica carinata
BcaNung03791 Brassica carinata
BolC1t00459H Brassica oleracea
BolC1t00622H Brassica oleracea
BolC1t00623H Brassica oleracea
BolC1t00624H Brassica oleracea
BolC3t16507H Brassica oleracea
BolC3t20899H Brassica oleracea
BolC3t20901H Brassica oleracea
BolC5t34335H Brassica oleracea
BolC5t34714H Brassica oleracea
BolC5t34716H Brassica oleracea
BolC5t34717H Brassica oleracea
BolC7t46456H Brassica oleracea
BolC7t46457H Brassica oleracea
BraA01t00424Z Brassica rapa
BraA01t00537Z Brassica rapa
BraA01t00538Z Brassica rapa
BraA03t12659Z Brassica rapa
BraA03t15330Z Brassica rapa
BraA05t22585Z Brassica rapa
BraA05t22586Z Brassica rapa
BraA05t22858Z Brassica rapa
BraA05t22859Z Brassica rapa
BraA08t33676Z Brassica rapa
C01p04750 Brassica napus
C01p06240 Brassica napus
C01p06250 Brassica napus
C01p06260 Brassica napus
C03p42340 Brassica napus
C03p42350 Brassica napus
C03p86110 Brassica napus
C03p86130 Brassica napus
C05p56710 Brassica napus
C05p60590 Brassica napus
C05p60600 Brassica napus
C07p60160 Brassica napus
CAN.G1231.31 Capsicum annuum
CAN.G1231.33 Capsicum annuum
CAN.G1231.34 Capsicum annuum
CANSAT01G1155 Cannabis sativa
CANSAT25G1275 Cannabis sativa
CARHR081230 Cardamine hirsuta
CARHR081240 Cardamine hirsuta
CARHR081300 Cardamine hirsuta
CARHR240640 Cardamine hirsuta
CARHR240650 Cardamine hirsuta
CARHR242210 Cardamine hirsuta
CARHR242220 Cardamine hirsuta
Carub.0003s0616 Capsella rubella
Carub.0006s2275 Capsella rubella
Carub.0007s0632 Capsella rubella
Carub.0007s0786 Capsella rubella
Carub.0007s0787 Capsella rubella
Ca_18711_v3 Cicer arietinum L.
CBR_g17730 Chara braunii
Cc02_g19010 Coffea canephora
CDE02G1550 Ceratophyllum demersum
CDE02G3215 Ceratophyllum demersum
CDE04G3492 Ceratophyllum demersum
Cfa004547 Carpinus fangiana
Cfa022658 Carpinus fangiana
Ciclev10027715m.g Citrus clementina
CiPaw.05G008400 Carya illinoinensis
CiPaw.06G171300 Carya illinoinensis
ClCG02G006070 Citrullus lanatus
COL.COLO4_32627 Corchorus olitorius
Cpa.g.sc200.25 Carica papaya
CsaV3_7G008470 Cucumis sativus L.
CSS0003725 Camellia sinensis var. sinensis
CSS0003761 Camellia sinensis var. sinensis
DCAR_022010 Daucus carota
DCAR_029075 Daucus carota
Dinv15736 Davidia involucrata
Dinv30011 Davidia involucrata
Dinv42172 Davidia involucrata
Dinv42173 Davidia involucrata
Duzib052G0365 Durio zibethinus
Duzib132G0131 Durio zibethinus
Duzib248G1549 Durio zibethinus
ECA234G3000 Erigeron canadensis
ECA236G4146 Erigeron canadensis
ECA236G4164 Erigeron canadensis
EL10Ac9g22322 Beta vulgaris
Eucgr.I01130 Eucalyptus grandis
FAN15G2265 Fragaria x ananassa
FAN20G0068 Fragaria x ananassa
FAN24G2894 Fragaria x ananassa
FAN27G3397 Fragaria x ananassa
FvH4_2g04251 Fragaria vesca
FvH4_2g05730 Fragaria vesca
Glyma.02G103800 Glycine max
Glyma.07G215200 Glycine max
Gohir.A03G187800 Gossypium hirsutum
Gohir.A03G187850 Gossypium hirsutum
Gohir.A13G042500 Gossypium hirsutum
Gohir.D02G208600 Gossypium hirsutum
Gohir.D13G040900 Gossypium hirsutum
Gorai.005G236600 Gossypium raimondii
Gorai.013G045900 Gossypium raimondii
GSVIVG01022083001 Vitis vinifera
GSVIVG01031710001 Vitis vinifera
HanXRQChr03g0070141 Helianthus annuus
HanXRQChr05g0135851 Helianthus annuus
HanXRQChr09g0250641 Helianthus annuus
HanXRQChr15g0484081 Helianthus annuus
HanXRQChr16g0509961 Helianthus annuus
HanXRQChr16g0515001 Helianthus annuus
Haze_10112 Corylus avellana
Haze_10115 Corylus avellana
HPP92_000199 Vanilla planifolia
HPP92_000230 Vanilla planifolia
Hund00120 Selenicereus undatus
Hund06339 Selenicereus undatus
Lalb_Chr05g0219311 Lupinus albus
Lalb_Chr16g0384861 Lupinus albus
Lj4g0010035 Lotus japonicus
Lj9A355T76 Lonicera japonica
Lj9C356G4 Lonicera japonica
Lsat_1_v5_gn_0_4161 Lactuca sativa
Lsat_1_v5_gn_2_37740 Lactuca sativa
Lsat_1_v5_gn_5_115740 Lactuca sativa
Manes.07G072800 Manihot esculenta
Manes.10G078500 Manihot esculenta
Mapoly0082s0015 Marchantia polymorpha
MD00G1138200 Malus domestica
MD05G1085000 Malus domestica
Medtr4g085550 Medicago truncatula
MELO3C018461.2 Cucumis melo
Migut.B00367 Erythranthe guttata
MSTRG.16728 Avicennia marina
MSTRG.20171 Avicennia marina
Nitab4.5_0000292g0070 Nicotiana tabacum
Nitab4.5_0000292g0080 Nicotiana tabacum
Nitab4.5_0001220g0010 Nicotiana tabacum
Nitab4.5_0001230g0020 Nicotiana tabacum
Nitab4.5_0001230g0030 Nicotiana tabacum
Nitab4.5_0002740g0030 Nicotiana tabacum
Nn1g04785 Nelumbo nucifera
Nn5g30358 Nelumbo nucifera
Oeu010384.1 Olea europaea
Oeu028240.1 Olea europaea
Oeu048698.2 Olea europaea
Os06g0639100 Oryza sativa ssp. japonica
Os08g0100400 Oryza sativa ssp. japonica
Peaxi162Scf00016g00211 Petunia axillaris
PGR142G0507 Punica granatum
PGSC0003DMG400025880 Solanum tuberosum
Phvul.003G047600 Phaseolus vulgaris
Potri.001G304100 Populus trichocarpa
Potri.009G099400 Populus trichocarpa
Pp3c15_7960 Physcomitrium patens
Pp3c15_8020 Physcomitrium patens
Pp3c1_24550 Physcomitrium patens
Pp3c9_10370 Physcomitrium patens
Pp3c9_10380 Physcomitrium patens
PRCOL_00003587 Prasinoderma coloniale
Prupe.8G129300 Prunus persica
Psat5g172600 Pisum sativum
Psat7g126400 Pisum sativum
PSO170G0111 Papaver somniferum
PSO170G6917 Papaver somniferum
PSO210G1934 Papaver somniferum
PSO407G0169 Papaver somniferum
PSO407G0215 Papaver somniferum
PSO407G0231 Papaver somniferum
PSO541G0156 Papaver somniferum
PSO541G2248 Papaver somniferum
PSO541G3046 Papaver somniferum
PSO541G4500 Papaver somniferum
PSO541G4572 Papaver somniferum
PSO541G4831 Papaver somniferum
PSO541G5863 Papaver somniferum
PSO541G6304 Papaver somniferum
PSO675G4323 Papaver somniferum
PSO675G4888 Papaver somniferum
PSO675G5225 Papaver somniferum
PSO675G5620 Papaver somniferum
PSO675G6714 Papaver somniferum
PSO675G7634 Papaver somniferum
PSO675G8350 Papaver somniferum
QL11p034831 Quercus lobata
RcHm_v2.0_Chr6g0256621 Rosa chinensis
Rhsim05G0086900 Rhododendron simsii
Rhsim11G0163900 Rhododendron simsii
Sabra09G0075700 Salix brachista
Sabra16G0190800 Salix brachista
SalBow6G6213 Salvia bowleyana
Sc14g0001810 Simmondsia chinensis
Sc14g0001820 Simmondsia chinensis
Sc14g0001830 Simmondsia chinensis
Sed0014443 Sechium edule
Sed0022765 Sechium edule
SEGI_06740 Sequoiadendron giganteum
SEGI_08024 Sequoiadendron giganteum
SEGI_28168 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27611 Striga asiatica
SHI05318 Sapria himalayana
SMO347G0169 Selaginella moellendorffii
Solyc01g020190.2 Solanum lycopersicum
Solyc01g107880.3 Solanum lycopersicum
Sopen01g050050 Solanum pennellii
Sp7g31810 Schrenkiella parvula
SpUn0912_0010 Schrenkiella parvula
TAR063G0001 Trochodendron aralioides
TAR381G0095 Trochodendron aralioides
TAR381G0378 Trochodendron aralioides
TAR381G0768 Trochodendron aralioides
TAR628G0580 Trochodendron aralioides
THA.LOC104807837 Tarenaya hassleriana
THA.LOC104827264 Tarenaya hassleriana
Thecc.02G103800 Theobroma cacao
Thhalv10020048m.g Eutrema salsugineum
Thhalv10022280m.g Eutrema salsugineum
Thhalv10022448m.g Eutrema salsugineum
Thhalv10022450m.g Eutrema salsugineum
Thhalv10024280m.g Eutrema salsugineum
TPR.G12707 Trifolium pratense
TWI31G1427 Tripterygium wilfordii
TWI75G1110 Tripterygium wilfordii
TWI79G1465 Tripterygium wilfordii
unitig_0.g96 Utricularia gibba
unitig_0.g97 Utricularia gibba
unitig_0.g98 Utricularia gibba
unitig_60.g25459 Utricularia gibba
vmacro02027 Vaccinium macrocarpon
vmacro19516 Vaccinium macrocarpon
VMungo0251G3159 Vigna mungo
Zm00001eb275450 Zea mays
Zm00001eb387290 Zea mays

User provided reference genes

Program Settings