Gene: Pp3c9_10380
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c9_10380
- Transcript Identifier Pp3c9_10380V3.3
- Gene Type Coding gene
- Location Chr09 : 6766895-6773037 : negative
Gene Family Information
- ID HOM05D002471
- #Genes/#Species 275/96
- Phylogenetic origin
- ID ORTHO05D003712
- #Genes/#Species 208/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c9_10380V3.3
- pacid 32913369
- alias Phpat.009G041200
- uniprot A0A2K1K2Q5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030433 | IBA | GOA Database | ubiquitin-dependent ERAD pathway | |
| GO:0010143 | ISO | PLAZA Integrative Orthology | cutin biosynthetic process | AT4G34100 |
| GO:1900486 | ISO | PLAZA Integrative Orthology | positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway | AT4G34100 |
| GO:0008299 | ISO | PLAZA Integrative Orthology | isoprenoid biosynthetic process | AT4G34100 |
| GO:0042335 | ISO | PLAZA Integrative Orthology | cuticle development | AT4G34100 |
| GO:0010345 | ISO | PLAZA Integrative Orthology | suberin biosynthetic process | AT4G34100 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT4G34100 |
| GO:0010025 | ISO | PLAZA Integrative Orthology | wax biosynthetic process | AT4G34100 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT4G34100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0030176 | IBA | GOA Database | integral component of endoplasmic reticulum membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.1.1.1.1 | Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Ac/N-degron pathway.Doa10 E3 ubiquitin ligase complex.E3 ubiquitin ligase component Doa10 |