Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12710 Brassica napus
A09p49130 Brassica napus
A09p51040 Brassica napus
Aa31LG10G13050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3764 Anthoceros agrestis
Actinidia17296 Actinidia chinensis
Actinidia25725 Actinidia chinensis
Ah.04g151280 Amaranthus hybridus
Ah.11g051050 Amaranthus hybridus
Ah.11g051060 Amaranthus hybridus
AL3G37200 Arabidopsis lyrata
AL5G37470 Arabidopsis lyrata
AL5G40250 Arabidopsis lyrata
Aqoxy1G02126 Aquilegia oxysepala
Aqoxy2G03114 Aquilegia oxysepala
Aqoxy3G01306 Aquilegia oxysepala
Aqoxy3G01398 Aquilegia oxysepala
Aqoxy3G01402 Aquilegia oxysepala
Aqoxy3G01418 Aquilegia oxysepala
Aqoxy4G00648 Aquilegia oxysepala
Aqoxy4G01236 Aquilegia oxysepala
Aqoxy4G01238 Aquilegia oxysepala
Aqoxy4G01240 Aquilegia oxysepala
Aqoxy4G01244 Aquilegia oxysepala
Aqoxy4G01950 Aquilegia oxysepala
Aqoxy5G04111 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1FS3R4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8RJT4U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AIPG6G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JJ739D Arachis hypogaea
AT3G22860 Arabidopsis thaliana
AT3G56150 Arabidopsis thaliana
ATR0580G434 Amborella trichopoda
Atru.chr2.2247 Acer truncatum
Atru.chr7.1010 Acer truncatum
AUR62003418 Chenopodium quinoa
AUR62015955 Chenopodium quinoa
AUR62021161 Chenopodium quinoa
AUR62026145 Chenopodium quinoa
AUR62029423 Chenopodium quinoa
AUR62030389 Chenopodium quinoa
BcaB01g00026 Brassica carinata
BcaB02g07521 Brassica carinata
BcaB02g07522 Brassica carinata
BcaB02g08383 Brassica carinata
BcaC02g09803 Brassica carinata
BcaC07g39930 Brassica carinata
BcaC07g40205 Brassica carinata
BcaC07g40249 Brassica carinata
BcaC07g40254 Brassica carinata
BolC4t25155H Brassica oleracea
BolC8t50765H Brassica oleracea
BolC8t50984H Brassica oleracea
BraA02t06327Z Brassica rapa
BraA09t40365Z Brassica rapa
BraA09t40550Z Brassica rapa
C04p36400 Brassica napus
C08p31440 Brassica napus
C08p33860 Brassica napus
CAN.G1103.10 Capsicum annuum
CAN.G1198.3 Capsicum annuum
CAN.G1379.27 Capsicum annuum
CAN.G1988.1 Capsicum annuum
CAN.G1993.2 Capsicum annuum
CAN.G394.57 Capsicum annuum
CAN.G660.21 Capsicum annuum
CAN.G871.7 Capsicum annuum
CANSAT21G1354 Cannabis sativa
CARHR050030 Cardamine hirsuta
CARHR050040 Cardamine hirsuta
CARHR098750 Cardamine hirsuta
CARHR166300 Cardamine hirsuta
Carub.0003s2300 Capsella rubella
Carub.0005s2290 Capsella rubella
Carub.0005s2523 Capsella rubella
Ca_00039_v3 Cicer arietinum L.
CBR_g23666 Chara braunii
Cc00_g13220 Coffea canephora
Cc09_g05410 Coffea canephora
CDE06G0184 Ceratophyllum demersum
CDE06G1285 Ceratophyllum demersum
CDE06G2058 Ceratophyllum demersum
Cfa006351 Carpinus fangiana
Cfa012900 Carpinus fangiana
Cfa012901 Carpinus fangiana
Cfa013302 Carpinus fangiana
Cfa020972 Carpinus fangiana
Cfa026105 Carpinus fangiana
Ciclev10011048m.g Citrus clementina
CiPaw.14G038500 Carya illinoinensis
ClCG05G009470 Citrullus lanatus
COL.COLO4_29441 Corchorus olitorius
Cpa.g.sc5.97 Carica papaya
Cpa.g.sc85.14 Carica papaya
Cre04.g217550 Chlamydomonas reinhardtii
CsaV3_3G019240 Cucumis sativus L.
CSS0026984 Camellia sinensis var. sinensis
CSS0042978 Camellia sinensis var. sinensis
DCAR_009561 Daucus carota
DCAR_020022 Daucus carota
DCAR_020023 Daucus carota
Dinv24028 Davidia involucrata
Dinv25027 Davidia involucrata
Duzib093G1074 Durio zibethinus
Duzib106G1136 Durio zibethinus
ECA234G1459 Erigeron canadensis
ECA236G1952 Erigeron canadensis
EL10Ac5g12886 Beta vulgaris
Eucgr.A02510 Eucalyptus grandis
Eucgr.L02825 Eucalyptus grandis
FAN03G0233 Fragaria x ananassa
FAN04G2089 Fragaria x ananassa
FAN05G1156 Fragaria x ananassa
FAN05G4296 Fragaria x ananassa
FAN08G1868 Fragaria x ananassa
FAN09G3076 Fragaria x ananassa
FAN09G3331 Fragaria x ananassa
FAN09G4329 Fragaria x ananassa
FAN10G0223 Fragaria x ananassa
FAN10G0714 Fragaria x ananassa
FAN13G1545 Fragaria x ananassa
FAN14G2341 Fragaria x ananassa
FAN14G5005 Fragaria x ananassa
FAN14G5233 Fragaria x ananassa
FAN18G1255 Fragaria x ananassa
FvH4_5g35510 Fragaria vesca
FvH4_6g21351 Fragaria vesca
FvH4_6g21360 Fragaria vesca
Glyma.03G206400 Glycine max
Glyma.05G245100 Glycine max
Glyma.08G052900 Glycine max
Gohir.A09G130800 Gossypium hirsutum
Gohir.A09G130900 Gossypium hirsutum
Gohir.D09G126700 Gossypium hirsutum
Gohir.D09G126800 Gossypium hirsutum
Gorai.006G145600 Gossypium raimondii
Gorai.006G145700 Gossypium raimondii
GSVIVG01024297001 Vitis vinifera
GSVIVG01033425001 Vitis vinifera
HanXRQChr10g0309871 Helianthus annuus
HanXRQChr12g0355961 Helianthus annuus
HanXRQChr12g0355981 Helianthus annuus
HanXRQChr12g0358791 Helianthus annuus
Haze_04426 Corylus avellana
Haze_20080 Corylus avellana
Haze_21782 Corylus avellana
Haze_26573 Corylus avellana
Hma1.2p1_0516F.1_g170540 Hydrangea macrophylla
HPP92_017196 Vanilla planifolia
HPP92_027336 Vanilla planifolia
HPP92_027337 Vanilla planifolia
Hund02253 Selenicereus undatus
Hund07354 Selenicereus undatus
Hund24711 Selenicereus undatus
Lalb_Chr02g0153891 Lupinus albus
Lalb_Chr20g0111121 Lupinus albus
Lalb_Chr25g0287691 Lupinus albus
Lj1g0019307 Lotus japonicus
Lj2A360T37 Lonicera japonica
Lj2A360T41 Lonicera japonica
Lj5g0007003 Lotus japonicus
Lsat_1_v5_gn_5_78820 Lactuca sativa
Lsat_1_v5_gn_8_99320 Lactuca sativa
Manes.08G039600 Manihot esculenta
Manes.09G040700 Manihot esculenta
Mapoly0167s0015 Marchantia polymorpha
MBI18_g28929_MAGBIO Magnolia biondii
MBI19_g19945_MAGBIO Magnolia biondii
MD05G1153900 Malus domestica
MD05G1154000 Malus domestica
MD05G1154100 Malus domestica
MD08G1196100 Malus domestica
MD12G1050600 Malus domestica
MD15G1383900 Malus domestica
Medtr0256s0060 Medicago truncatula
Medtr0256s0080 Medicago truncatula
Medtr1g023190 Medicago truncatula
Medtr2g005610 Medicago truncatula
Medtr2g048870 Medicago truncatula
Medtr2g078570 Medicago truncatula
Medtr6g045905 Medicago truncatula
Medtr6g045910 Medicago truncatula
Medtr6g045925 Medicago truncatula
Medtr6g046050 Medicago truncatula
Medtr6g046630 Medicago truncatula
Medtr7g116960 Medicago truncatula
MELO3C019434.2 Cucumis melo
Migut.D01959 Erythranthe guttata
MSTRG.11472 Avicennia marina
MSTRG.4370 Avicennia marina
Nitab4.5_0000070g0280 Nicotiana tabacum
Nitab4.5_0000070g0300 Nicotiana tabacum
Nitab4.5_0002836g0010 Nicotiana tabacum
Nitab4.5_0002836g0020 Nicotiana tabacum
Nn1g08327 Nelumbo nucifera
Nn4g25075 Nelumbo nucifera
Oeu016416.2 Olea europaea
Os02g0123300 Oryza sativa ssp. japonica
Os07g0124500 Oryza sativa ssp. japonica
Peaxi162Scf00587g00036 Petunia axillaris
Peaxi162Scf00774g00012 Petunia axillaris
PGR004G2724 Punica granatum
PGR119G1277 Punica granatum
PGSC0003DMG400030412 Solanum tuberosum
PGSC0003DMG402018223 Solanum tuberosum
Phvul.001G200000 Phaseolus vulgaris
Phvul.002G328808 Phaseolus vulgaris
Potri.002G016900 Populus trichocarpa
Potri.005G245100 Populus trichocarpa
Potri.016G063500 Populus trichocarpa
Pp3c13_10890 Physcomitrium patens
Pp3c26_10770 Physcomitrium patens
Pp3c3_8500 Physcomitrium patens
Pp3c4_24410 Physcomitrium patens
Pp3c4_24414 Physcomitrium patens
PRCOL_00000846 Prasinoderma coloniale
Prupe.1G530000 Prunus persica
Prupe.7G086100 Prunus persica
Psat1g222840 Pisum sativum
Psat4g039600 Pisum sativum
PSO210G4203 Papaver somniferum
PSO210G5677 Papaver somniferum
PSO339G2597 Papaver somniferum
PSO384G1443 Papaver somniferum
QL04p014082 Quercus lobata
QL04p014151 Quercus lobata
QL06p003632 Quercus lobata
QL07p025605 Quercus lobata
RcHm_v2.0_Chr3g0477961 Rosa chinensis
RcHm_v2.0_Chr3g0477971 Rosa chinensis
RcHm_v2.0_Chr7g0236891 Rosa chinensis
Rhsim10G0043600 Rhododendron simsii
Sabra02G0013500 Salix brachista
Sabra05G0189400 Salix brachista
Sabra16G0065900 Salix brachista
SalBow6G3155 Salvia bowleyana
SalBow6G4295 Salvia bowleyana
Sc07g0002720 Simmondsia chinensis
Sed0009427 Sechium edule
Sed0017291 Sechium edule
SEGI_26805 Sequoiadendron giganteum
SEGI_29968 Sequoiadendron giganteum
SEGI_33909 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31818 Striga asiatica
SGA_v2.0_scaffold7G04147 Striga asiatica
SHI18338 Sapria himalayana
SMO343G0152 Selaginella moellendorffii
SMO367G1171 Selaginella moellendorffii
Solyc01g102560.2 Solanum lycopersicum
Solyc01g102570.4 Solanum lycopersicum
Solyc01g102590.3 Solanum lycopersicum
Solyc06g076150.3 Solanum lycopersicum
Sopen01g044990 Solanum pennellii
Sopen01g045010 Solanum pennellii
Sopen06g032550 Solanum pennellii
Sp5g04390 Schrenkiella parvula
Sp5g06370 Schrenkiella parvula
TAR365G0796 Trochodendron aralioides
TAR636G0975 Trochodendron aralioides
THA.LOC104802240 Tarenaya hassleriana
THA.LOC104821160 Tarenaya hassleriana
Thecc.05G180800 Theobroma cacao
Thhalv10005778m.g Eutrema salsugineum
Thhalv10005781m.g Eutrema salsugineum
TPR.G22303 Trifolium pratense
TPR.G32270 Trifolium pratense
TWI53G1217 Tripterygium wilfordii
TWI74G0885 Tripterygium wilfordii
TWI77G0531 Tripterygium wilfordii
unitig_744.g24398 Utricularia gibba
unitig_744.g24399 Utricularia gibba
vmacro05625 Vaccinium macrocarpon
vmacro07320 Vaccinium macrocarpon
VMungo0251G1365 Vigna mungo
VMungo1383G3550 Vigna mungo
Zm00001eb069390 Zea mays
Zm00001eb069420 Zea mays
Zm00001eb074650 Zea mays
Zm00001eb316690 Zea mays

User provided reference genes

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